Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq209621 118 1e-21
seq123391 118 1e-21
seq207831 84.2 3e-11
>seq209621
Length=1424
Score = 118 bits (130), Expect = 1e-21
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || || |||||||||| || ||||| || || || || || ||| ||||||
Sbjct 648 TCACCTATGATGATGAGTCTGGTAGTCTGGAAGAGCTGCTCATCGTCCCAGGTGGGATGT 589
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
||| | ||||| || || || ||||||||||| ||||| ||||| || || ||||||||
Sbjct 588 TCTTGCTTCAGGACGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACATG 529
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGC 9777
|||| || |||| || |||||| ||| ||||||| |||||||||
Sbjct 528 GTGAGGCCCGGCAGCATGCCAAAGAACTCCTGACCGATGGCCAGACGC 481
>seq123391
Length=1400
Score = 118 bits (130), Expect = 1e-21
Identities = 169/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 8693 GGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCA 8752
||||||| ||| |||| ||| || || || | ||| | | | ||||||||
Sbjct 1291 GGACACCACTTGGTGTTGAGACACACCAGTTTCTTCAAAGTGGAAGTTTTGACGATATTG 1232
Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812
|| ||| || || || || |||||||| |||||||| | ||||||||||| |||
Sbjct 1231 AAGCCCGTCTCGCCCCCAAAAGTGCTGGGCTTCCAGTACTCAGGGGAGCAGATAGGGTTT 1172
Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872
|||| |||||||| ||||| || ||||| |||| ||| | || |||||||| || ||
Sbjct 1171 CCCATCAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCAACCATACTCTCACCAAATATA 1112
Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGT 8930
| || ||||||| || |||| |||| || | ||| ||||| | ||| || ||||
Sbjct 1111 GTGTGAGGACGGGTTTTCTCCAGTAAGATGCCCGGGTAGAACTCTAAAGCATCTATGT 1054
>seq207831
Length=3119
Score = 84.2 bits (92), Expect = 3e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672
|| || |||||||| || |||||||| ||||| ||||| ||| ||| ||||| |||
Sbjct 2399 CCAATGATGATGAGGCGGGTGGTCTGGAACAGCTGTTCATCATCCCAGGTGGGATGCTCT 2340
Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACAT 9728
|||||| | || || |||| ||| || ||||| ||||| | |||||||||||
Sbjct 2339 GCTTTCAGGATGTCACAGACTCGGTTATGCTCCCTCAGCCACAGTGTAGCGTACAT 2284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 705884314058160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |