Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq145495 183 5e-42 >seq145495 Length=638 Score = 183 bits (202), Expect = 5e-42 Identities = 203/271 (75%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | | ||| || ||||||||||| |||||||||||||| ||||| Sbjct 294 CGCCAAGCGTCACCGTAAAGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 353 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| |||||||| || |||||| |||| || || |||| || |||| Sbjct 354 CCGCCGTCTGGCTCGCCGTGGTGGCGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 413 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || ||||| | ||||| ||| ||| |||| ||| || || ||| ||||| Sbjct 414 TCGCGGAGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 473 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| |||||||| | || || || |||| | || || Sbjct 474 GCACGCCAAGAGAAAGACCGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 533 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 ||| | | || || || || ||||| || Sbjct 534 CCGCACCCTGTACGGCTTCGGCGGTTAAACT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78802609425327