Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq285305 150 5e-31 >seq285305 Length=1559 Score = 150 bits (166), Expect = 5e-31 Identities = 460/702 (66%), Gaps = 32/702 (5%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||| ||| || || || | |||||| || ||| | || || || || ||| Sbjct 489 ATGAAGGACGACAGCATTGAAGGCATTTATGACACGCTGAAGCAGTGCGCCCTCATCTCC 548 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACA------- 363733 || || || ||||| ||||| | || | |||| |||| || Sbjct 549 AAATCAGCGGGAGGAATCGGTGTGGCTGTCAGC--------TGCATCAGATCAACCGGGA 600 Query 363734 GTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792 | ||||| ||| ||||| || |||| || ||||| || |||||||| | || | Sbjct 601 GCTACAT-CGCTGGCACCAACGGCAACTCTAACGGGCTCGTCCCCATGCTGAGGGTTTAC 659 Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852 |||| || || | |||||||||||||| || ||| | || || || || ||| Sbjct 660 AACAACACGGCACGATACGTCGACCAGGGAGGCAACAAGAGACCCGGAGCCTTCGCCATG 719 Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGG 363911 || || ||||| ||| ||| | || || ||||||| |||| ||| |||||||| Sbjct 720 TACCTGGAGCCGTGGCATTTTGATGTGTTCGA-TTTCTTGGAGCTGAAGAAGAACACGGG 778 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 || ||||| | || | || || ||||| | || ||| | | |||| || || Sbjct 779 CAAGGAGGAGCAAAGAGCCAGAGACCTTTTCTACGGCCTGTGGATCCCCGACCTCTTCAT 838 Query 363972 GAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 |||| | ||||| ||| |||| | |||| || | || || ||| ||||| || | Sbjct 839 GAAGAGAGTGGAAAGCAACCAAGACT-GGTCTCTGATGTGTCCGAGCGAGTGTCCCGGGC 897 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 | ||| ||||| || || | || ||||| ||| || ||||| |||||| | Sbjct 898 TGGACGAGTGCTGGGGGGAGGAGTTTGAGGCTCTCTACACCAAATATGAGAGGGAGGGCA 957 Query 364091 AGG-----CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| | ||| | || || ||| || | |||| |||||| || || || || Sbjct 958 AGGTCAAGCGCGTG-GTGAAG----GCTCAGCAGGTGTGGTATGCCATTATTGAGTCCCA 1012 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 || || || || ||||| || ||| | |||||||| | |||||| | ||| |||||| Sbjct 1013 GACAGAAACCGGTACACCGTACATGCTCTACAAAGACGCCTGCAACAGGAAGAGCAACCA 1072 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 |||| | || || || || | || || || || || ||||| ||||||||||| Sbjct 1073 GCAGAATCTCGGCACCATCAAATGCAGTAATCTCTGCACAGAGATAGTTGAATACACCAG 1132 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 | || ||| || || ||||| || ||||| ||||| || Sbjct 1133 CCAGGATGAGGTGGCGGTCTGTAATCTGGCGTCCATCGCTCT 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298374911844698