Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 150 5e-31
>seq285305
Length=1559
Score = 150 bits (166), Expect = 5e-31
Identities = 460/702 (66%), Gaps = 32/702 (5%)
Strand=Plus/Plus
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||||||||| ||| || || || | |||||| || ||| | || || || || |||
Sbjct 489 ATGAAGGACGACAGCATTGAAGGCATTTATGACACGCTGAAGCAGTGCGCCCTCATCTCC 548
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACA------- 363733
|| || || ||||| ||||| | || | |||| |||| ||
Sbjct 549 AAATCAGCGGGAGGAATCGGTGTGGCTGTCAGC--------TGCATCAGATCAACCGGGA 600
Query 363734 GTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792
| ||||| ||| ||||| || |||| || ||||| || |||||||| | || |
Sbjct 601 GCTACAT-CGCTGGCACCAACGGCAACTCTAACGGGCTCGTCCCCATGCTGAGGGTTTAC 659
Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852
|||| || || | |||||||||||||| || ||| | || || || || |||
Sbjct 660 AACAACACGGCACGATACGTCGACCAGGGAGGCAACAAGAGACCCGGAGCCTTCGCCATG 719
Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGG 363911
|| || ||||| ||| ||| | || || ||||||| |||| ||| ||||||||
Sbjct 720 TACCTGGAGCCGTGGCATTTTGATGTGTTCGA-TTTCTTGGAGCTGAAGAAGAACACGGG 778
Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971
|| ||||| | || | || || ||||| | || ||| | | |||| || ||
Sbjct 779 CAAGGAGGAGCAAAGAGCCAGAGACCTTTTCTACGGCCTGTGGATCCCCGACCTCTTCAT 838
Query 363972 GAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030
|||| | ||||| ||| |||| | |||| || | || || ||| ||||| || |
Sbjct 839 GAAGAGAGTGGAAAGCAACCAAGACT-GGTCTCTGATGTGTCCGAGCGAGTGTCCCGGGC 897
Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090
| ||| ||||| || || | || ||||| ||| || ||||| |||||| |
Sbjct 898 TGGACGAGTGCTGGGGGGAGGAGTTTGAGGCTCTCTACACCAAATATGAGAGGGAGGGCA 957
Query 364091 AGG-----CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
||| | ||| | || || ||| || | |||| |||||| || || || ||
Sbjct 958 AGGTCAAGCGCGTG-GTGAAG----GCTCAGCAGGTGTGGTATGCCATTATTGAGTCCCA 1012
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
|| || || || ||||| || ||| | |||||||| | |||||| | ||| ||||||
Sbjct 1013 GACAGAAACCGGTACACCGTACATGCTCTACAAAGACGCCTGCAACAGGAAGAGCAACCA 1072
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265
|||| | || || || || | || || || || || ||||| |||||||||||
Sbjct 1073 GCAGAATCTCGGCACCATCAAATGCAGTAATCTCTGCACAGAGATAGTTGAATACACCAG 1132
Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307
| || ||| || || ||||| || ||||| ||||| ||
Sbjct 1133 CCAGGATGAGGTGGCGGTCTGTAATCTGGCGTCCATCGCTCT 1174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1298374911844698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |