Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq285305 205 9e-48 seq12009 131 2e-25 >seq285305 Length=1559 Score = 205 bits (226), Expect = 9e-48 Identities = 711/1096 (65%), Gaps = 40/1096 (4%) Strand=Plus/Minus Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGA 145303 |||||| || ||||||||||||||||| | ||||||| |||| | || ||| | Sbjct 1549 GTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGAGAGCCCGGG 1490 Query 145304 AAGGAACTGTAACTGCCCCAAGTTTT----GGCGAGCTCGCAACTCGCCTCCAGAGCGCC 145359 | | ||| |||| || | ||| || ||||| ||||||||||| | | Sbjct 1489 TACGTCTCGTAGGTGCC----GTGCTCGGCGGCCAGATCGCAGCTCGCCTCCAGGGAAGC 1434 Query 145360 GAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGG 145419 | | || |||||||| ||| || |||||||| || || || ||| || |||| Sbjct 1433 GTAGTAGATTGTCTCAAAAATCTGGATGTTGAGCCGCTGAGCCTCTGGGCTTTCAAACGG 1374 Query 145420 CATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATG 145479 |||| ||| | || || || || | || || | || | ||||| |||| || Sbjct 1373 GTAACGCATCAGGATGAAGGCGTCCGCCAATCCTTGGACACCGATCCCGATCGGCCTGTG 1314 Query 145480 TTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 | ||||| |||| | ||| ||| | ||| | | ||| |||||| || Sbjct 1313 ACGCTTGTTGGACTTCTCAGCTTCGGGCACTGGGTAGAAGTT-GAT----GTCGATGATC 1259 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||||| ||| | ||| || || | || || |||| ||||||||| | Sbjct 1258 TTGTTCAGGTTTCTCACAATTACTTTGGTCACTTGGGCCAGTTTTTTAAAGTCAAA---A 1202 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 | | ||| | || | | |||| ||||| ||||||| |||||| || ||| | Sbjct 1201 GTCCGCTCAGGGGTGACGTACATGTTGAGAGCGATGGACGCCAGATTACAGACCGCCACC 1142 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCC 145714 || || | | |||||| || ||||| | ||| | ||| || ||||||||||| || Sbjct 1141 TCATCCTGGCTGGTGTATTCAACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCG 1082 Query 145715 AGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCA 145774 ||||| ||||| || || ||||||||||| ||||| |||||||||||||||||| || Sbjct 1081 AGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCG 1022 Query 145775 GTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGG 145834 || || ||| | ||| | || | || | ||| || |||| ||| | Sbjct 1021 GTTTCTGTCTGGGACTCAATAATGGCATACCACACCTGCTGAGCCTTCACCACGCGCTTG 962 Query 145835 TAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCG 145894 |||||| || ||||| ||||||| |||||||| | || |||| ||| Sbjct 961 ACCTTGCCCTCCCTCTCATATTTGGTGTAGAGAGCCTCAAACTCCTCCCCCCAGCACTCG 902 Query 145895 GACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGC 145954 ||| |||||||||| | | ||||||||||| ||||| | |||| | || | | Sbjct 901 TCCAGCCCGGGACACTCGCTCGGACACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTC 842 Query 145955 TCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTTTGCAATCCT 146012 | ||| || | || || | |||||| |||| | | ||| | || |||||| |||| Sbjct 841 TTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAAAGGTCTCTGGCTCTTTGC--TCCT 784 Query 146013 CAGCACCCATGTTTCGCTTCAAAT-TAAGCACACTATAGATGTCCGCGTGCCACGGTTCA 146071 | ||| |||| ||||| | ||| | | | | | || |||||||| || Sbjct 783 CCTTGCCCGTGTTCTTCTTCAGCTCCAAGAAATCGA-ACACATCAAAATGCCACGGCTCC 725 Query 146072 ATATAGACGGCGAGGGCTCC--TTTTCGT-TTGCCACCCTGGTCCACGTGACGTACCATG 146128 | || | ||||| |||||| | || | ||||| |||||||| |||| ||| || || Sbjct 724 AGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCTCCCTGGTCGACGTATCGTGCCGTG 665 Query 146129 TTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---AGAGTTT 146185 ||||| | || | || |||||| ||| ||| | | |||||| || || | Sbjct 664 TTGTTGTAAACCCTCAGCATGGGGACGAGCCCGTTAGAGTTGCCGTTGGTGCCAGCG--- 608 Query 146186 ATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTG 146245 || | | ||| || | | ||| ||| ||| |||| || || | | ||| Sbjct 607 ATGTAGCTCCCGGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCCGCTGATTTG 548 Query 146246 GATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--CTTCGAA 146303 || || |||||| | ||||| || || ||||| |||||||| ||| |||| | Sbjct 547 GAGATGAGGGCGCACTGCTTCAGCGTGTCATAAATGCCTTCAATGCTGTCGTCCTTC--A 490 Query 146304 TGCCGAGCAGAAAGCA 146319 || ||||||| ||||| Sbjct 489 TGGCGAGCAGGAAGCA 474 >seq12009 Length=4249 Score = 131 bits (144), Expect = 2e-25 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | || |||||||| ||||| |||||| ||||||||||||||||||| ||||| | Sbjct 3093 TGTACTCTATGATCTCGGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGT 3034 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | || ||||||||||| |||||||||||||||||||| ||| |||||| || ||| | Sbjct 3033 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCAGTTTCTGTCTGTG 2974 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 2973 ACTCGATGAT 2964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470253732197760