Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 145 8e-30
>seq285305
Length=1559
Score = 145 bits (160), Expect = 8e-30
Identities = 626/969 (65%), Gaps = 48/969 (5%)
Strand=Plus/Minus
Query 153206 CCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265
|||||| | | ||| ||| | ||||||||||||||| | | || ||| | ||
Sbjct 1559 CCACAGGTCTGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGG 1500
Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAGTTCGCAGCTAGCCTCGA 153324
| ||| | |||| |||| |||||| || | |||||| |||||||| ||||| |
Sbjct 1499 AGAGCCCGGGTACGTCTCGTAGGTGCCGT-GCTCGGCGGCCAGATCGCAGCTCGCCTCCA 1441
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCG--CTTCTTCGCT 153382
| | | ||||| || || || || || | ||||| | || | | ||| |||
Sbjct 1440 GGGAAGCGTAGTAGATTGTCTCAAAAATCTGGATGTTGAG--CCGCTGAGCCTCTGGGCT 1383
Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442
|| |||| |||| ||| | |||||||| |||| || |||| ||||| |||||
Sbjct 1382 TTCAAACGGGTAACGCATCAGGATGAAGGCGTCCGCCAATCCTTGGACACCGATCCCGAT 1323
Query 153443 GGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGA 153497
|| | || || |||| || || ||| || | |||| ||| |||
Sbjct 1322 CGGCCTGTGACGCTTGTTGGACTTCTCAGCTTCGGGCAC----TGGG-TAGAAGTTGATG 1268
Query 153498 TCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTA--TCGCCTTAAGTTTCTCGA 153555
||||| || ||||| ||||| | ||| | ||||| || | | | | ||||| | |
Sbjct 1267 TCGATGATCTTGTTCAGGTTTCTCACAATTACTTTGGTCACTTGGGCC--AGTTTTTTAA 1210
Query 153556 AATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614
| ||| | ||| || | | ||||| || || | || || ||||||||||||
Sbjct 1209 AGTCAAAAGTCCGCTCAGGGGTGACGTAC--ATG--TTGAGAGCGATGGACGCCAGATTA 1154
Query 153615 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674
||||| ||| ||| || | | |||| | || ||||| | |||||| || ||||||
Sbjct 1153 CAGACCGCCACCTCATCCTGGCTGGTGTATTCAACTATCTCTGTGCAGAGATTACTGCAT 1094
Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATG 153734
|| ||| ||| | ||| ||||| ||||| || | ||||| ||||||||| ||||||||
Sbjct 1093 TTGATGGTGCCGAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATG 1034
Query 153735 TACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCT 153791
|||||| ||||| || || | || | || | ||| || | ||| ||
Sbjct 1033 TACGGTGTACCGGTTTCTGTCTGGGACTCAATAATGGCATACC---ACACCTGCTGAGCC 977
Query 153792 CGCACC-CGC---TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAA 153847
|||| ||| || | | |||||| ||||| ||| ||| || ||||||
Sbjct 976 TTCACCACGCGCTTGACCTT----GCCCTCCCTCTCATATTTGGTGTAGAGAGCCTCAAA 921
Query 153848 CTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACAT 153907
||| || || |||| ||| | || |||||||||| |||||||||||| |||||
Sbjct 920 CTCCTCCCCCCAGCACTCGTCCAGCCCGGGACACTCGCTCGGACACATCAGAGACCAGTC 861
Query 153908 ATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTC 153967
| || | | || | |||||| || || || | ||| || |||| | |||||
Sbjct 860 TTGGTTGCTTTCCACTCTCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAAAGGTC 801
Query 153968 GC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGAT-TGAGCACGCTATAGAT 154024
| || | |||| |||||| |||| |||| ||||| | || | | | | |
Sbjct 800 TCTGGCTCTTTGC--TCCTCCTTGCCCGTGTTCTTCTTCAGCTCCAAGAAATCGA-ACAC 744
Query 154025 GTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGCCCTG 154081
|| ||||| || || | ||| | ||| | ||| || | | || || |||||
Sbjct 743 ATCAAAATGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCTCCCTG 684
Query 154082 ATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGT 154141
||||||| || || | |||||| | || | || |||||| | || ||| | | | |
Sbjct 683 GTCGACGTATCGTGCCGTGTTGTTGTAAACCCTCAGCATGGGGACGAGCCCGTTAGAGTT 624
Query 154142 GCCGTTGGT 154150
|||||||||
Sbjct 623 GCCGTTGGT 615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494412960304080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |