Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 122 8e-23
seq12009 84.2 2e-11
>seq285305
Length=1559
Score = 122 bits (134), Expect = 8e-23
Identities = 304/453 (67%), Gaps = 9/453 (2%)
Strand=Plus/Minus
Query 146340 GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTT 146399
|||||| |||||||| || ||||| | | |||| || ||||| ||| | |||
Sbjct 1463 GGCCAGATCGCAGCTCGCCTCCAGGGAAGCGTAGTAGATTGTCTCAAAAATCTGGATGTT 1404
Query 146400 GACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCG 146457
|| || ||| ||||| ||| || | ||| || || | || | |||||||| ||
Sbjct 1403 GA-GCCGCTGAGCCTCTGGGCTTTCAAACGGG-TAACGCATCAGGATGAAGGCGTCCGCC 1346
Query 146458 AGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCG-C 146516
| || || | |||| || | || | ||| |||||| ||| |||| | | |
Sbjct 1345 AATCCTTGGACACCGATCCCGATCGGCCTGTGACGCTTGTTGGACTTCTCAGCTTCGGGC 1286
Query 146517 AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAA 146576
| |||| ||| |||| |||||||||||||||| || || | ||| | | ||| ||||
Sbjct 1285 ACTGGG-TAGAAGTTGATGTCGATGATCTTGTTCAGGTTTCTCACAATTACTTTGGTCAC 1227
Query 146577 ACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGC 146636
| ||| | ||||||| || | | | ||||| || |||||| ||
Sbjct 1226 TTGGGCCAGTTTTTTAAAGTCAAAAGTCCGC---TCAGGGGTGACGTACATGTTGAGAGC 1170
Query 146637 GATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGC 146696
||| || |||| ||||| || || ||| |||| | | || | || ||||| |
Sbjct 1169 GATGGACGCCAGATTACAGACCGCCACCTCATCCTGGCTGGTGTATTCAACTATCTCTGT 1110
Query 146697 GCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGG 146756
|||||| || ||||| |||||| |||| | ||| | ||||| || | |||||||||
Sbjct 1109 GCAGAGATTACTGCATTTGATGGTGCCGAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGC 1050
Query 146757 GTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
||| |||||||||||||||||| ||||||||
Sbjct 1049 GTCTTTGTAGAGCATGTACGGTGTACCGGTTTC 1017
>seq12009
Length=4249
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 146689 ATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG 146748
||||||| ||| || |||||| | |||||| | |||| ||| | ||||| || | ||
Sbjct 3082 ATCTCGGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCTG 3023
Query 146749 TTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
||||||| |||||||||||||||||| ||| || |||||
Sbjct 3022 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCAGTTTC 2982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473728733337360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |