Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq123391 91.5 2e-13 seq209621 86.0 9e-12 >seq123391 Length=1400 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 8939 GTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGG 8998 ||||| ||||| | || || || || || || |||||||| ||||||||| | ||| Sbjct 1246 GTTTTGACGATATTGAAGCCCGTCTCGCCCCCAAAAGTGCTGGGCTTCCAGTACTCAGGG 1187 Query 8999 GAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATG 9058 |||||||| ||| |||| || ||||||| ||| || ||||| |||| ||| | || Sbjct 1186 GAGCAGATAGGGTTTCCCATCAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCAACCATA 1127 Query 9059 CTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCG 9118 |||||||| || || | ||||| | ||| || | | || ||| | ||||| || Sbjct 1126 CTCTCACCAAATATAGTGTGAGGACGGGTTTTCTCCAGTAAGATGCCCGGGTAGAACTCT 1067 Query 9119 ACAGCCTC 9126 | ||| || Sbjct 1066 AAAGCATC 1059 >seq209621 Length=1424 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/139 (74%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 9710 TGGTT-TCCCCGGTAATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCC 9768 ||||| || || | ||||| || | || || || || | |||||| || |||| Sbjct 654 TGGTTCTCACCTATGATGATGAGTCTGGTAGTCTGGAAGAGCTGCTCATCGTCCCAGGTG 595 Query 9769 GGGTGTTCGTGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCG 9828 || ||||| || || || || || ||||| |||||||| || |||||||||||||||||| Sbjct 594 GGATGTTCTTGCTTCAGGACGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCG 535 Query 9829 TACATCATTAAACCCGGCA 9847 ||||| | | ||||||| Sbjct 534 TACATGGTGAGGCCCGGCA 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721030855722600