Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 131 3e-25
seq12009 96.9 5e-15
>seq285305
Length=1559
Score = 131 bits (144), Expect = 3e-25
Identities = 342/519 (66%), Gaps = 16/519 (3%)
Strand=Plus/Minus
Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943
|| || ||||| ||||| | |||| ||| || | || | || ||||||||| |
Sbjct 1123 TCAACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCGAGATTCTGCTGGTTGCTC 1064
Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGC 205003
|| | ||| |||| ||| ||||| | |||| |||| | ||| | || |||| ||
Sbjct 1063 TTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCGGTTTCTGTCTGGGACTCA 1004
Query 205004 AGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTA--CATCCCTTGAG 205058
| |||| ||||| | |||||| |||| |||| || | | |||||
Sbjct 1003 ATAATGGCATACCACACCTGCTGAGCCTTCACCACGCGCTTGACCTTGCCCTCCCT---- 948
Query 205059 ACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACC---GTACACGTCCATCAGCCCTG 205115
||| ||||| ||||| || ||| |||| || || | || |||||| |||| |
Sbjct 947 -CTCATATTTGGTGTAGAGAGCCTCAAACTCCTCCCCCCAGCACTCGTCCA---GCCCGG 892
Query 205116 GACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACA 205175
|||| | | ||||||||||||||||| || | | || ||| |||| ||| || |
Sbjct 891 GACACTCGCTCGGACACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTCTTCATGAAGA 832
Query 205176 GGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGT 205235
||||| ||||||||||||||| || || || | ||| || | || | || ||
Sbjct 831 GGTCGGGGATCCACAGGCCGTAGAAAAGGTCTCTGGCTCTTTGCTCCTCCTTGCCCGTGT 772
Query 205236 TCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCA 205295
|||| |||| |||| || | | || ||||||||||| | ||| ||| |
Sbjct 771 TCTTCTTCAGCTCCAAGAAATCGAACACATCAAAATGCCACGGCTCCAGGTACATGGCGA 712
Query 205296 TTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTC 205355
|| || || |||||||| || |||||||| || || | | | |||| |||| |
Sbjct 711 AGGCTCCGGGTCTCTTGTTGCCTCCCTGGTCGACGTATCGTGCCGTGTTGTTGTAAACCC 652
Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394
|||||| || || || ||||| | | | ||||| ||||
Sbjct 651 TCAGCATGGGGACGAGCCCGTTAGAGTTGCCGTTGGTGC 613
>seq12009
Length=4249
Score = 96.9 bits (106), Expect = 5e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
||| |||||| ||||| || ||||||| |||||| | | |||| ||||| | | || |
Sbjct 4089 TGACCTGAAACTCTCCAGAGAGCACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCAA 4030
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| |||||||||||| | ||||| || ||| ||| ||||||||||| |||| |||||
Sbjct 4029 TGGACTCGTTGTTGCCAAGTATCTGGGCAGTGGAGGCTGTGGGCATGGGGGCCATGAGCA 3970
Query 204312 GGGAGTTGCGCACACC 204327
| ||| | ||||||
Sbjct 3969 GACTGTTCCTCACACC 3954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792191865297840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |