Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq171131 111 2e-19
seq178749 102 8e-17
seq9526 95.1 1e-14
>seq171131
Length=971
Score = 111 bits (122), Expect = 2e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333
|||| |||| || ||||||||||||||||||||||||||||| || |||| ||||||
Sbjct 730 GCTC-ACCAAGTTCTCGTTGACGATGCCGTCGCTGGCGGCGAAGAAAGCCAACACGTGAG 672
Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393
|||||| | |||||| | ||| |||| |||||||| || |||||| |||||||
Sbjct 671 AGATGAAGTAGCGCTCCTCGTCCTTCAGAGACTCCCAGTGCTGCAGGTCCTTTGACAGGT 612
Query 133394 CCACCT 133399
||||||
Sbjct 611 CCACCT 606
Score = 82.4 bits (90), Expect = 8e-11
Identities = 89/116 (77%), Gaps = 4/116 (3%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225
|||||||||||||| || | ||||| || ||||| | ||||||||||||||| || |
Sbjct 971 TAGGTGTCGATGAGCAGGCTG--TACATCTCTGAGTGGATGTTCTCCATGGCGATCTGGA 914
Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
| || || || || | ||||| |||||||||||| || | ||| ||||| |||
Sbjct 913 AACCATAGAAACATCTGGCCTCCGTCACCTGCACTTCCTGGGTGAAGCGCTCCACC 858
>seq178749
Length=757
Score = 102 bits (112), Expect = 8e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| ||| ||||| |||||| ||| |||| |||||||| ||||| | || |
Sbjct 308 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCTCTTCT 367
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || ||||||||||| || || ||||||| ||||| || || ||||| |
Sbjct 368 TCAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATCCCCTCCACAGCGGCGAAGG 427
Query 133037 CCACCAGGCGCTCGCC 133052
|||||| |||||| ||
Sbjct 428 CCACCACGCGCTCTCC 443
>seq9526
Length=675
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405
|| |||||| | ||||| ||| |||| || | || ||||| |||||||| || | |||
Sbjct 675 GGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGC 616
Query 38406 ACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGA 38465
|||||| ||||||||||||||| ||||| | || || ||| | || |||||| ||||
Sbjct 615 ACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGG 556
Query 38466 GGCGG 38470
|| ||
Sbjct 555 GGTGG 551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498308787269760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |