Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq269824 109 2e-18 >seq269824 Length=1075 Score = 109 bits (120), Expect = 2e-18 Identities = 450/700 (64%), Gaps = 25/700 (4%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||||| || ||||||| || ||||| || |||| ||| |||| || || Sbjct 1004 ATTGGTATTGATCTGGGCACCACCTACTCTTGTGTTGGGGTTTTCCAGCATGGCAAAGTG 945 Query 450977 GAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGT----TTTA 451031 || ||||| || ||||| || || | || |||| ||||| || | || || |||| Sbjct 944 GAGATTATTGCCAATGATCAGGG-TAACAGAACCACTCC--CA--GCTATGTGGCCTTTA 890 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA-TGG---TAAATTCAAATG 451085 | || | || || || | || | ||||| || | ||| ||| | ||| ||| Sbjct 889 CTGACACTGAGAGGCTCATTGGAGATGCTGCCAAGAACCAAGTGGCTATGAATCCAA--- 833 Query 451086 CCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG 451145 |||| |||| | | |||||| ||||| | ||||| | | || | | ||| || Sbjct 832 CCAA---CACAATCTTTGATGCCAAACGGCTCATTGGAAGAAAGTTTAACGATCCGGTTG 776 Query 451146 TACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATA 451205 | || || | || | | ||| | || | | | | || ||||| || | Sbjct 775 TTCATTCTGACATGAAGCTTTGGCCTTTCAAGGTGATCAGTGACAATGGAAAACCAAAAG 716 Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 | || ||| | |||||||| || ||||| |||| ||| || ||||| || || |||| Sbjct 715 TCCAGGTAGAGTATAAAGGCGAGACTAAGGCTTTCTATCCAGAGGAAATCTCTTCCATGG 656 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 | || ||||||||| || | || ||| || | || || || |||||| Sbjct 655 TCCTGGTTAAAATGAAGGAGATTGCTGAAGCCTACCTGGGACAGAGGGTGTCTAATGCAG 596 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | || || ||||| || ||||||||||| | || | ||||| || || ||||| || Sbjct 595 TCATCACAGTTCCAGCGTATTTCAATGACTCTCAGAGACAAGCCACCAAGGATGCTGGGG 536 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 || |||| | ||| |||| | || || || || || |||||||| || | || | Sbjct 535 TGATCTCTGGGCTGAATATTCTGAGGATCATCAACGAGCCCACAGCAGCAGCCATCGCTT 476 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 | || ||| ||| | ||| || ||| ||| | | | |||||| |||| | Sbjct 475 ACGGTTTAGATAAAGGTA---AAAGAGGAGAGCGCAATGTACTTATCTTTGATCTTGGCG 419 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 |||| || ||| || | || | ||||| ||||| | ||||| || || | | Sbjct 418 GAGGCACCTTTGACGTGTCCATCCTGACCATTGAGGATGGTATCTTTGAGGTGAAATCCA 359 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || || || || || || ||||| |||| || Sbjct 358 CCGCGGGAGACACACACCTTGGTGGGGAAGACTTTGACAA 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1968171341553012