Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq269824 163 4e-35
seq140600 132 6e-26
>seq269824
Length=1075
Score = 163 bits (180), Expect = 4e-35
Identities = 458/692 (66%), Gaps = 12/692 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||| ||||| | |||||| || |||||||| | ||| || |||||||||||
Sbjct 322 TCAAAGTCTTCCCCACCAAGGTGTGTGTCTCCCGCGGTGGATTTCACCTCAAAGATACCA 381
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || || ||||| || || || || || ||||| || |||||
Sbjct 382 TCCTCAATGGTCAGGATGGACACGTCAAAGGTGCCTCCGCCAAGATCAAAGATAAGTACA 441
Query 7577 TTCGTATCGTCGTCTTTGTTC-TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| || || ||||| | ||||| | |||||| ||||| || || || || || ||
Sbjct 442 TTGCGCTC-TCCTCTTTTACCTTTATCTAAACCGTAAGCGATGGCTGCTGCTGTGGGCTC 500
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| || || | ||| ||||| |||| || | ||||| || || |||||||
Sbjct 501 GTTGATGATCCTCAGAATATTCAGCCCAGAGATCACCCCAGCATCCTTGGTGGCTTGTCT 560
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || || || || || || || || || | ||| || | | || ||| || ||
Sbjct 561 CTGAGAGTCATTGAAATACGCTGGAACTGTGATGACTGCATTAGACACCCTCTGTCCCAG 620
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
|| | ||| || || || |||||||| || ||||| || || || || || |
Sbjct 621 GTAGGCTTCAGCAATCTCCTTCATTTTAACCAGGACCATGGAAGAGATTTCCTCTGGATA 680
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG-CACCGG 7874
|| || || || || ||| | || || | | | ||||| ||| | |||
Sbjct 681 GAAAGCCTTAGTCTCGCCTTTATACTCTACCTGGACTTTTGGTTT-TCCATTGTCAC--- 736
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
||| ||||| | | |||| ||||| || || || | || ||||||||
Sbjct 737 TGATCACCTTGAAAGGCCAAAGCTTCATGTCAGAATGAACAACCGGATCGTTAAACTTTC 796
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
|||| || || || || |||||||| | |||||| | || ||||| || ||||||||
Sbjct 797 TTCCAATGAGCCGTTTGGCATCAAAGATTGTGTTGGTTGGATTCATAGCCACTTGGTTCT 856
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTC 8053
| || || || || || || | || | | | || ||||| || || || | |||| ||
Sbjct 857 TGGCAGCATCTCCAATGAGCC--TC-TCAGTGTCAGTAAAGGCCACATA-GCTGGGAGTG 912
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
|||| || || || || || |||||||| || || | | | || | || || ||
Sbjct 913 GTTCTGTTACCCTGATCATTGGCAATAATCTCCACTTTGCCATGCTGGAAAACCCCAACA 972
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145
|| || || || || || | ||||||||| ||
Sbjct 973 CAAGAGTAGGTGGTGCCCAGATCAATACCAAT 1004
>seq140600
Length=1543
Score = 132 bits (146), Expect = 6e-26
Identities = 355/541 (66%), Gaps = 4/541 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| ||||| || || |||||||| ||||| || | ||||| || || ||| || ||
Sbjct 865 GCACCGTAGGCCACAGCCTCATCTGGGTTGATGCTCTTATTAAGGTCCCGACCATTGAAG 924
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || | |||||| || ||||| ||||| || ||||| |||| || ||
Sbjct 925 AAGTCCTGCAGCAGCTTTTGAATCTTGGGGATACGTGTGGAGCCACCCACCAGGACAATG 984
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | | || || ||||| | || | || | || || ||||| || |
Sbjct 985 TCATGTATCTGGGCCTTGTCCATCTTGGCATCCCTCAGGGCCTTCTCCACAGGCTCGAGG 1044
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
| |||||| | ||| | || ||||||||||| || | || || || || |||
Sbjct 1045 GTTCCACGGAAGAGGTCTGCATTAAGCTCCTCAAAACGGGCTCTAGTGATTGAAGTGTAG 1104
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATA 7337
|| || || || || | ||||| || |||||| | | || ||| | | |||
Sbjct 1105 AAGTCCGTTCCTTCATAGAGTGAATCGATCTCAATGCTGGCCTGAGTGCTGCTGGAGAGG 1164
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|| || || || |||||||| || || || | |||||| | || ||| || |
Sbjct 1165 --GTGCGTTTGGCACGCTCACAGGCTGTGCGCAGACGACGCACAGCTCGCTTATTGTTGT 1222
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
|| ||||| || || || || ||||| | |||||| || | || |
Sbjct 1223 TGATTTCTTTTTTGAACTTGCGCTTGAACTCAGTAATGAAGTGGTTAACCATTCGGTTGT 1282
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
| || || |||||||||||||| || || || || || | ||||| |||||||| ||
Sbjct 1283 CAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCTGTGGACTTGACCTCAAAGATGCCGT 1342
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| |||||| | | | || |||||||| ||||| || || |||||||| || || || |
Sbjct 1343 CCTCAATGGTCAGAATTGACACATCAAAAGTACCCCCTCCAAGGTCAAAGATAAGGACAT 1402
Query 7578 T 7578
|
Sbjct 1403 T 1403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632765826776760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |