Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq269824 163 4e-35 seq140600 132 6e-26 >seq269824 Length=1075 Score = 163 bits (180), Expect = 4e-35 Identities = 458/692 (66%), Gaps = 12/692 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||| | |||||| || |||||||| | ||| || ||||||||||| Sbjct 322 TCAAAGTCTTCCCCACCAAGGTGTGTGTCTCCCGCGGTGGATTTCACCTCAAAGATACCA 381 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || || ||||| || || || || || ||||| || ||||| Sbjct 382 TCCTCAATGGTCAGGATGGACACGTCAAAGGTGCCTCCGCCAAGATCAAAGATAAGTACA 441 Query 7577 TTCGTATCGTCGTCTTTGTTC-TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || || ||||| | ||||| | |||||| ||||| || || || || || || Sbjct 442 TTGCGCTC-TCCTCTTTTACCTTTATCTAAACCGTAAGCGATGGCTGCTGCTGTGGGCTC 500 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || | ||| ||||| |||| || | ||||| || || ||||||| Sbjct 501 GTTGATGATCCTCAGAATATTCAGCCCAGAGATCACCCCAGCATCCTTGGTGGCTTGTCT 560 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || || || || || || || || | ||| || | | || ||| || || Sbjct 561 CTGAGAGTCATTGAAATACGCTGGAACTGTGATGACTGCATTAGACACCCTCTGTCCCAG 620 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | ||| || || || |||||||| || ||||| || || || || || | Sbjct 621 GTAGGCTTCAGCAATCTCCTTCATTTTAACCAGGACCATGGAAGAGATTTCCTCTGGATA 680 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG-CACCGG 7874 || || || || || ||| | || || | | | ||||| ||| | ||| Sbjct 681 GAAAGCCTTAGTCTCGCCTTTATACTCTACCTGGACTTTTGGTTT-TCCATTGTCAC--- 736 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| ||||| | | |||| ||||| || || || | || |||||||| Sbjct 737 TGATCACCTTGAAAGGCCAAAGCTTCATGTCAGAATGAACAACCGGATCGTTAAACTTTC 796 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||| || || || || |||||||| | |||||| | || ||||| || |||||||| Sbjct 797 TTCCAATGAGCCGTTTGGCATCAAAGATTGTGTTGGTTGGATTCATAGCCACTTGGTTCT 856 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTC 8053 | || || || || || || | || | | | || ||||| || || || | |||| || Sbjct 857 TGGCAGCATCTCCAATGAGCC--TC-TCAGTGTCAGTAAAGGCCACATA-GCTGGGAGTG 912 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 |||| || || || || || |||||||| || || | | | || | || || || Sbjct 913 GTTCTGTTACCCTGATCATTGGCAATAATCTCCACTTTGCCATGCTGGAAAACCCCAACA 972 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || || || || | ||||||||| || Sbjct 973 CAAGAGTAGGTGGTGCCCAGATCAATACCAAT 1004 >seq140600 Length=1543 Score = 132 bits (146), Expect = 6e-26 Identities = 355/541 (66%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || |||||||| ||||| || | ||||| || || ||| || || Sbjct 865 GCACCGTAGGCCACAGCCTCATCTGGGTTGATGCTCTTATTAAGGTCCCGACCATTGAAG 924 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | || | |||||| || ||||| ||||| || ||||| |||| || || Sbjct 925 AAGTCCTGCAGCAGCTTTTGAATCTTGGGGATACGTGTGGAGCCACCCACCAGGACAATG 984 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | | || || ||||| | || | || | || || ||||| || | Sbjct 985 TCATGTATCTGGGCCTTGTCCATCTTGGCATCCCTCAGGGCCTTCTCCACAGGCTCGAGG 1044 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 | |||||| | ||| | || ||||||||||| || | || || || || ||| Sbjct 1045 GTTCCACGGAAGAGGTCTGCATTAAGCTCCTCAAAACGGGCTCTAGTGATTGAAGTGTAG 1104 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATA 7337 || || || || || | ||||| || |||||| | | || ||| | | ||| Sbjct 1105 AAGTCCGTTCCTTCATAGAGTGAATCGATCTCAATGCTGGCCTGAGTGCTGCTGGAGAGG 1164 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397 || || || || |||||||| || || || | |||||| | || ||| || | Sbjct 1165 --GTGCGTTTGGCACGCTCACAGGCTGTGCGCAGACGACGCACAGCTCGCTTATTGTTGT 1222 Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 || ||||| || || || || ||||| | |||||| || | || | Sbjct 1223 TGATTTCTTTTTTGAACTTGCGCTTGAACTCAGTAATGAAGTGGTTAACCATTCGGTTGT 1282 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || |||||||||||||| || || || || || | ||||| |||||||| || Sbjct 1283 CAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCTGTGGACTTGACCTCAAAGATGCCGT 1342 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | |||||| | | | || |||||||| ||||| || || |||||||| || || || | Sbjct 1343 CCTCAATGGTCAGAATTGACACATCAAAAGTACCCCCTCCAAGGTCAAAGATAAGGACAT 1402 Query 7578 T 7578 | Sbjct 1403 T 1403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632765826776760