Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq52848 87.8 2e-12 >seq52848 Length=1214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| || || || |||| ||||||||| | || | ||| ||||| || ||||| || | Sbjct 226 CCTCATCCCTGCTAATCAGCTCATTAGAATAGGTGAGACCCGGCATTAGGCCTCTCTTCT 167 Query 19043 ttAACCAGAATATAGAAGCAAA-TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 ||| ||| | || | |||||| || ||||| ||||| || || || || ||||||||| Sbjct 166 TTAGCCAATAAATGGCAGCAAACNGAGCCAGAGAAGAAGATGCCCTCCACCGCTGCAAAA 107 Query 19102 GCAACTAGTCTTTCTCC 19118 || || | || ||||| Sbjct 106 GCCACGATTCGCTCTCC 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560013968055960