Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq211158 138 9e-28
seq90574 105 5e-18
seq90573 105 5e-18
>seq211158
Length=742
Score = 138 bits (152), Expect = 9e-28
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
||||| |||| ||| || |||||||| || || || | ||||||||||||||| || ||
Sbjct 557 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 498
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || || ||||| || || || | |||||| |||||||| || ||||| ||||| |
Sbjct 497 ACTCCCAGACCCATATCGCCTGAGCGCTGGTACAGCTGACATGACAGCTCGCCGTCATGC 438
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
||||| |||||||| | || ||| || ||||| || ||||||||
Sbjct 437 ACGTAGAACTGACAGAGGGCGTGACATGGAGGCAGCGCCATGAG 394
>seq90574
Length=499
Score = 105 bits (116), Expect = 5e-18
Identities = 84/101 (83%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| ||||||||||||||||| | ||| ||||||| ||| |||||| ||||| || |||
Sbjct 269 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 328
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 112202
||||| ||||| ||||| || ||||| |||||||| |||||
Sbjct 329 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 369
>seq90573
Length=6224
Score = 105 bits (116), Expect = 5e-18
Identities = 84/101 (83%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| ||||||||||||||||| | ||| ||||||| ||| |||||| ||||| || |||
Sbjct 231 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 172
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 112202
||||| ||||| ||||| || ||||| |||||||| |||||
Sbjct 171 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 131
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 111860 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTATGGGAGAAAAGTGTCGCACGCAA 111919
|||||| || |||||||||| | || || || | | ||||| || ||||| ||| |||
Sbjct 1498 ACTCTGCCAATAGACGATATTTGTCCAGGCTGATTTCAGGGAGGAACGTGTCACACTCAA 1439
Query 111920 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTCC 111978
| ||| || | || ||||| ||||| ||| | ||||||||||||||||| | ||||
Sbjct 1438 ACTGCTTCAGGATTTGTGTGACGAACAGTCTCCTGGTCCCCGGGCTCTCCATAAACTCC 1380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 407132859730247
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |