Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 147 3e-30
>seq285305
Length=1559
Score = 147 bits (162), Expect = 3e-30
Identities = 485/739 (66%), Gaps = 29/739 (4%)
Strand=Plus/Plus
Query 75703 CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA---TGGTCTCT 75759
||||||||| || ||||| ||||||||| | || ||| | ||| ||||||||
Sbjct 815 CCTGTGGATCCCCGACCTCTTCATGAAGAGAGT---GGAAAGCAACCAAGACTGGTCTCT 871
Query 75760 TTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCC 75818
| ||||| | || || || || ||| || | ||| ||||||||||| || |
Sbjct 872 GATGTGTCCGAGCGAGTGTCCCGGGCTGGACGAGTGCTGGGGG-GAGGAGTTTGAGGCTC 930
Query 75819 TCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG-ATGTT 75877
||||||| || ||||| |||||| | | ||| ||| || || | | | | ||
Sbjct 931 TCTACACCAAATATGAGAGGGAGGGCAAGGTCAA-GCGCGTGGTGAAGGCTCAGCAGGTG 989
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | || ||| | | || ||||| || || || ||||| || ||||| ||||| ||
Sbjct 990 TGGTATGCCATTATTGAGTCCCAGACAGAAACCGGTACACCGTACATGCTCTACAAAGAC 1049
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|| || |||| |||||| ||||| ||||| | || || ||||| || ||||| |||
Sbjct 1050 GCCTGCAACAGGAAGAGCAACCAGCAGAATCTCGGCACCATCAAATGCAGTAATCTCTGC 1109
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|| || || | || ||||| |||||||| ||| || || ||| |||| || |||
Sbjct 1110 ACAGAGATAGTTGAATACACCAGCCAGGATGAGGTGGCGGTCTGTAATCTGGCGTCCATC 1169
Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117
|| || | ||| |||| ||| || |||||||| | | ||||||| ||
Sbjct 1170 GCTCTCAACATGTACGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTGGCCCAA 1226
Query 76118 ATCA-CAAAG--ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174
| | ||||| ||||| | ||| || ||| |||| |||| || || || ||
Sbjct 1227 GTGACCAAAGTAATTGT---GAGAAACCTGAACAAGATCATCGACATCAACTTCTACCCA 1283
Query 76175 GT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAA 76231
|| || ||| | ||||| || | ||| ||||| || || || | ||||| |||
Sbjct 1284 GTGCCCGAAGCTGAG---AAGTCCAACAAGCGTCACAGGCCGATCGGGATCGGTGTCCAA 1340
Query 76232 GGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAG 76291
|| | ||||| | || || || || ||| | ||||| || || || |
Sbjct 1341 GGATTGGCGGACGCCTTCATCCTGATGCGTTACCCGTTTGAAAGCCCAGAGGCTCAGCGG 1400
Query 76292 ATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTG 76351
| || | || ||||| || || || |||| |||||||||||||| || || ||
Sbjct 1401 CTCAACATCCAGATTTTTGAGACAATCTACTACGCTTCCCTGGAGGCGAGCTGCGATCTG 1460
Query 76352 GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC-CCAAGGG-GTGC 76409
|| | | || || |||| ||||| | ||| ||||| ||| |||||| | |
Sbjct 1461 GCCGCCGAGCACGGCACCTACGAGACGTACCCGGGCTCTCC--TGTCAGCAAGGGCATCC 1518
Query 76410 TTCAGTTTGATATGTGGGA 76428
| |||| || ||||||||
Sbjct 1519 TCCAGTACGACATGTGGGA 1537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594346341700320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |