Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq285305 147 3e-30 >seq285305 Length=1559 Score = 147 bits (162), Expect = 3e-30 Identities = 485/739 (66%), Gaps = 29/739 (4%) Strand=Plus/Plus Query 75703 CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA---TGGTCTCT 75759 ||||||||| || ||||| ||||||||| | || ||| | ||| |||||||| Sbjct 815 CCTGTGGATCCCCGACCTCTTCATGAAGAGAGT---GGAAAGCAACCAAGACTGGTCTCT 871 Query 75760 TTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCC 75818 | ||||| | || || || || ||| || | ||| ||||||||||| || | Sbjct 872 GATGTGTCCGAGCGAGTGTCCCGGGCTGGACGAGTGCTGGGGG-GAGGAGTTTGAGGCTC 930 Query 75819 TCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG-ATGTT 75877 ||||||| || ||||| |||||| | | ||| ||| || || | | | | || Sbjct 931 TCTACACCAAATATGAGAGGGAGGGCAAGGTCAA-GCGCGTGGTGAAGGCTCAGCAGGTG 989 Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || ||| | | || ||||| || || || ||||| || ||||| ||||| || Sbjct 990 TGGTATGCCATTATTGAGTCCCAGACAGAAACCGGTACACCGTACATGCTCTACAAAGAC 1049 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || |||| |||||| ||||| ||||| | || || ||||| || ||||| ||| Sbjct 1050 GCCTGCAACAGGAAGAGCAACCAGCAGAATCTCGGCACCATCAAATGCAGTAATCTCTGC 1109 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | || ||||| |||||||| ||| || || ||| |||| || ||| Sbjct 1110 ACAGAGATAGTTGAATACACCAGCCAGGATGAGGTGGCGGTCTGTAATCTGGCGTCCATC 1169 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117 || || | ||| |||| ||| || |||||||| | | ||||||| || Sbjct 1170 GCTCTCAACATGTACGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTGGCCCAA 1226 Query 76118 ATCA-CAAAG--ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 | | ||||| ||||| | ||| || ||| |||| |||| || || || || Sbjct 1227 GTGACCAAAGTAATTGT---GAGAAACCTGAACAAGATCATCGACATCAACTTCTACCCA 1283 Query 76175 GT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAA 76231 || || ||| | ||||| || | ||| ||||| || || || | ||||| ||| Sbjct 1284 GTGCCCGAAGCTGAG---AAGTCCAACAAGCGTCACAGGCCGATCGGGATCGGTGTCCAA 1340 Query 76232 GGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAG 76291 || | ||||| | || || || || ||| | ||||| || || || | Sbjct 1341 GGATTGGCGGACGCCTTCATCCTGATGCGTTACCCGTTTGAAAGCCCAGAGGCTCAGCGG 1400 Query 76292 ATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTG 76351 | || | || ||||| || || || |||| |||||||||||||| || || || Sbjct 1401 CTCAACATCCAGATTTTTGAGACAATCTACTACGCTTCCCTGGAGGCGAGCTGCGATCTG 1460 Query 76352 GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC-CCAAGGG-GTGC 76409 || | | || || |||| ||||| | ||| ||||| ||| |||||| | | Sbjct 1461 GCCGCCGAGCACGGCACCTACGAGACGTACCCGGGCTCTCC--TGTCAGCAAGGGCATCC 1518 Query 76410 TTCAGTTTGATATGTGGGA 76428 | |||| || |||||||| Sbjct 1519 TCCAGTACGACATGTGGGA 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594346341700320