Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq269824 201 1e-46
seq212102 150 2e-31
seq200202 89.7 7e-13
seq180218 89.7 7e-13
seq178611 89.7 7e-13
seq44531 84.2 3e-11
>seq269824
Length=1075
Score = 201 bits (222), Expect = 1e-46
Identities = 656/1008 (65%), Gaps = 10/1008 (1%)
Strand=Plus/Minus
Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361
|||||||| ||| | || || || ||||| |||||||| || | || ||| ||
Sbjct 1004 ATTGGTATTGATCTGGGCACCACCTACTCTTGTGTTGGGGTTTTCCAGCATGGCAAAGTG 945
Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421
|||||||| | ||||| || || ||| | || ||||| || || |||||||| ||
Sbjct 944 GAGATTATTGCCAATGATCAGGGTAACAGAACCACTCCCAGCTATGTGGCCTTTACTGAC 885
Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481
| ||| | ||| |||||||||| || || || || |||||||| || | ||| ||
Sbjct 884 ACTGAGAGGCTCATTGGAGATGCTGCCAAGAACCAAGTGGCTATGAATCCAACCAACACA 825
Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541
||||||| || || || || ||||| | |||||| ||| | || || ||
Sbjct 824 ATCTTTGATGCCAAACGGCTCATTGGAAGAAAGTTTAACGATCCGGTTGTTCATTCTGAC 765
Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601
|| ||| ||| ||| | ||| || || ||| || || || | | | ||
Sbjct 764 ATGAAGCTTTGGCCTT-TCAAGGTGATCA--GTGACAATGGAAAACCAAAAGTCCAGGTA 708
Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661
|| | | | || |||| || || ||| || ||||| || || ||||| || ||
Sbjct 707 GAGTATAAAGGCGAGACTAAGGCTTTCTATCCAGAGGAAATCTCTTCCATGGTCCTGGTT 648
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|| |||||||||| ||| ||| | | | |||| | | ||| ||||||| | ||
Sbjct 647 AAAATGAAGGAGATTGCTGAAGCCTACCTGGGACAGAGGGTGTCTAATGCAGTCATCACA 588
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || || |||| ||| || || |||| || || ||||| |||| | || |
Sbjct 587 GTTCCAGCGTATTTCAATGACTCTCAGAGACAAGCCACCAAGGATGCTGGGGTGATCTCT 528
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || || ||| || || ||||| || || ||||| || || || ||||| ||| |
Sbjct 527 GGGCTGAATATTCTGAGGATCATCAACGAGCCCACAGCAGCAGCCATCGCTTACGGTTTA 468
Query 195842 GACAA-GAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
|| || | || || || || |||||| | ||||||||||| || || || || ||
Sbjct 467 GATAAAGGTAAAAGAGGA-GAGCGCAATGTACTTATCTTTGATCTTGGCGGAGGCACCTT 409
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
||| || || | || | ||||| | |||||| || || || || | || || || ||
Sbjct 408 TGACGTGTCCATCCTGACCATTGAGGATGGTATCTTTGAGGTGAAATCCACCGCGGGAGA 349
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA-TGCACG-TCTTCTCCGTCATTTGTCTGATGAG 196018
|| || || ||||| ||||| || || || | | || ||||| || ||
Sbjct 348 CACACACCTTGGTGGGGAAGACTTTGACAACAGGATGGTCNAACCACTTTGT-AGAGGAA 290
Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078
|| |||| | ||||| || || |||| || || | | |||| |
Sbjct 289 TTTAAAAGAAAACACAAGAAGGACATCAGCCAAAATAAGAGAGCAGTGAGAAGGCTGCGT 230
Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138
|| || ||||| | || || |||| || || || | | || | | | |||||
Sbjct 229 ACAGCTTGTGAGAGAGCGAAGAGAACCCTGTCCTCCAGCACCCAGGCCAGCATCGAGATC 170
Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198
|| || | ||||| ||||| |||||||| || | || || | ||||| ||||| |||
Sbjct 169 GACTCTCTCTTTGAGGGAATCGACTTCTACACCTCCATCACGAGGGCACGCTTTGAGGAG 110
Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT-CGTGACGC 196257
| |||||||| | || ||| |||| || |||| | ||| ||| | || ||
Sbjct 109 CTCAACTCTGAACTCTTCAGGGGAACACTGGAGCCAGTTG-AGAAGGCCTTACAAGATGC 51
Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305
||| |||||||||| ||| | |||| || ||||| || || || ||
Sbjct 50 CAAGCTGGATAAGTCCAAGATCCATGAGATCGTCCTGGTTGGTGGCTC 3
>seq212102
Length=1117
Score = 150 bits (166), Expect = 2e-31
Identities = 490/765 (64%), Gaps = 35/765 (5%)
Strand=Plus/Plus
Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192
|||||||| || | ||||| || || |||||||| || | || || | ||||| |||
Sbjct 133 GAGATTGACTCTCTCTTTGAGGGCATCGACTTCTACACCTCCATCACGAGGGCACGCTTT 192
Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT-CG 196251
|| ||| | |||||||| | || ||| |||| || |||||| ||| ||| |
Sbjct 193 GAGGAGCTCAACTCTGAGCTCTTCAGGGGAACACTGGAGCCAGTTGAA-AAGGCCTTACA 251
Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA---- 196307
|| || ||| |||||||||| ||| | |||| || ||||| || || || || |
Sbjct 252 AGATGCCAAGCTGGATAAGTCCAAGATCCATGAGATCGTCCTGGTTGGTGGCTCCANNNN 311
Query 196308 ----------------------CCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTT 196344
| | ||||| || || || || | ||| | | |||
Sbjct 312 NNNNNNNNNNNNNNNNNNNNNNCAAGAATTCCCAAAATCCAGAAGCT-CTTGCAGGACTT 370
Query 196345 CTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
||| || || ||| | ||||| | |||||||| ||||||||||| || ||||| ||
Sbjct 371 CTTTAACGGTAGAGACCTGAACAAGAGTATCAACCCAGATGAAGCAGTGGCATATGGGGC 430
Query 196405 GGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATA-ATAACGTCCA---AGATCTTC 196460
|| || |||||||| || ||| |||| | || | | || |||||
Sbjct 431 AGCAGTCCAGGCTGCAATCCTCATGGGTGAT-ACTTCAGAGAATGTCCAGNNNNNNNNNN 489
Query 196461 TGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTA 196520
|| || || || | || |||||| |||| || || ||||| ||||||||
Sbjct 490 NNNNNNNNGACGTGGCTCCGCTGTCTCTGGGTATTGAGACTGCAGGTGGAGTTATGACAT 549
Query 196521 AAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATT 196580
| || | | ||||| || || || | ||| || || |||| || || || |
Sbjct 550 CTCTAATCAAACGTAACACCACCATCCCCTCCAAGCAGACCCAGATCTTCTCCACATACT 609
Query 196581 CCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGG 196640
| ||||| || |||||||| | ||||| || | ||| || || | || | ||||
Sbjct 610 CAGATAACCAGCCAGGTGTCCTGATTCAGGTGTTTGAGGGTGAGAGAGCCATGACCAAGG 669
Query 196641 ATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTC 196700
| ||| |||| || |||| || || | | || || || |||| ||| | ||||| |
Sbjct 670 ACAACAATCTCCTAGGAAAGTTTGAACTCTCAGGTATCCCTCCTGCTCCCCGTGGTGTAC 729
Query 196701 CACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGG 196760
| ||| | | || ||| || || || || ||||| ||||| || || | || | ||
Sbjct 730 CTCAGGTGGAGGTGACCTTTGACATCGATGCCAATGGCATTCTGAATGTGTCTGCCGTGG 789
Query 196761 ACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTA 196820
| || | || ||| | || || || |||||||||||||| || || |
Sbjct 790 ATAAAAGCACCGGAAAAGAAAACAAAATCACCATCACCAATGACAAGGGTCGCCTCAGCA 849
Query 196821 AGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGG 196865
| ||||| || || || ||||| |||||||| |||||||||| ||
Sbjct 850 AAGAGGACATAGAGCGGATGGTACAAGATGCTGAAAAGTACAAGG 894
>seq200202
Length=1384
Score = 89.7 bits (98), Expect = 7e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||||||||| || || || ||||| || ||||||||||| ||| |
Sbjct 398 ATGCAGATTTTTGTGAAAACACTGACGGGTAAAACCATTACCCTCGAGGTGGAGCCCAGT 457
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCAT 171968
||||| ||||| || |||||||||| || ||||| || ||||| ||
Sbjct 458 GACACTATCGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTAT 504
>seq180218
Length=724
Score = 89.7 bits (98), Expect = 7e-13
Identities = 113/153 (74%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757
||||| | | |||| || | || || || || ||||||| ||| || || || |||||
Sbjct 332 ACTGTAACAAATGCTGTAATCACCGTGCCGGCCTACTTCAATGACTCTCAGCGCCAGGCC 391
Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAACCAAC 195816
|| || ||||| | | || |||| || || |||| || | || |||||||| |||||
Sbjct 392 ACCAAAGACGCAGGGACCATCTCGGGACTTAA-TGTCCTTCGTATCATCAATGAGCCAAC 450
Query 195817 AGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| ||||| ||||||||||| || ||||| ||
Sbjct 451 TGCTGCTGCTATTGCTTATGGCCTTGACAAAAA 483
>seq178611
Length=5228
Score = 89.7 bits (98), Expect = 7e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364
|| || ||| | || || || || || ||||| || ||| || ||| || |||
Sbjct 1370 GGAATTGATCTGGGCACCACATATTCCTGTGTGGGCATATTCCAGCATGGCAAAGTGGAG 1311
Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424
|| || | ||||||||||||||| | || || || || || ||||||||||| | |
Sbjct 1310 ATCATTGCCAATGACCAAGGAAACAGGACTACACCCAGCTATGTGGCCTTTACAGACACT 1251
Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484
|| | || |||||||||| || || |||||| || |||||||| | ||| |||||
Sbjct 1250 GAGAGACTGATTGGAGATGCTGCCAAGAATCAGGTGGCCATGAACCCCACCAACACTGTA 1191
Query 195485 TTTG 195488
||||
Sbjct 1190 TTTG 1187
>seq44531
Length=239
Score = 84.2 bits (92), Expect = 3e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| ||||| || || |||||||| ||||| ||| |
Sbjct 91 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 32
Query 171922 GACACAATCGATAACATCAAAGCCAAGAT 171950
||||||||||| || |||| ||||||||
Sbjct 31 GACACAATCGAGAATGTCAAGGCCAAGAT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655410719524080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |