Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq222163 178 2e-38
seq65760 170 3e-36
seq12009 89.7 8e-12
seq173670 86.0 1e-10
>seq222163
Length=1444
Score = 178 bits (196), Expect = 2e-38
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 1485486 CTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGC 1485545
|||||| ||||| || ||||||||| |||||||||| ||| ||| | |||||| |||||
Sbjct 840 CTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGTTCCCCGGGCAGCAGCAGGCGGACGGC 899
Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGC 1485605
|||||||||||| | || | ||| ||| ||| ||||| | |||||||||| ||
Sbjct 900 GGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGTTTGTTGTAGTGCGCCAGGCGCGACGC 959
Query 1485606 CTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTT 1485665
|| ||||||| || | |||||||||||||||||||||||||| ||| | ||
Sbjct 960 TTCTCCAGCGATGCGCTCAAAGATGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTT 1019
Query 1485666 GTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713
| |||||| ||| ||| |||||||||||||| ||||| ||||| ||
Sbjct 1020 GGAGGAGATCCCCGTGTCTGGGTGCACCTGCTTCAGCACTTTGTACAC 1067
>seq65760
Length=666
Score = 170 bits (188), Expect = 3e-36
Identities = 184/244 (75%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| ||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 207 TGTACTTGGTCACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 266
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || ||||| |||||||||||||| | || | ||| ||| ||||||||| |
Sbjct 267 GCAGGAGACGCACAGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 326
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||||| |||||| | |||| || || | |||||| | || || |||||||
Sbjct 327 GAGCCAGGCGAGAGGCCTCACCGGCGATACGCTCAAAGATGTCGCTCACGAAGGAGTTCA 386
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||| ||||| |||||||| ||||| ||||
Sbjct 387 TGATGCCCATAGCCTTGGACGAGATGCCGGTGTCAGGGTGGACCTGCTTCAGCACTTTGT 446
Query 1485710 AAAC 1485713
| ||
Sbjct 447 ACAC 450
>seq12009
Length=4249
Score = 89.7 bits (98), Expect = 8e-12
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 2069616 AAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTC 2069675
||| || || |||||||| ||||| |||||||||||||| ||| | |||| | |||
Sbjct 4082 AAACTCTCCAGAGAGCACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCAATGGACTC 4023
Query 2069676 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAG 2069729
| ||||||| || ||||| | || | ||| ||||||||| | |||| ||||||
Sbjct 4022 GTTGTTGCCAAGTATCTGGGCAGTGGAGGCTGTGGGCATGGGGGCCATGAGCAG 3969
>seq173670
Length=465
Score = 86.0 bits (94), Expect = 1e-10
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 1485484 GCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACG 1485543
|| ||||| |||||||| |||||||| ||||||| || ||| ||| | ||| | |||
Sbjct 3 GCTTTGGTGCCCTCTGACACGGCGTGTTTGGCCAGCTCCCCGGGCAGCAGCAGCCTCACT 62
Query 1485544 GCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC-GCGCCAGGCGGCC 1485602
|||||||| | ||| | | || ||| ||| ||| ||||| || | | ||||| |||
Sbjct 63 GCGGTCTGCACCTCTCTGCTGGTGATGGTGGAGCGTTTGTT-GTACTGAGCCAGCCGGGA 121
Query 1485603 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653
|| || || | || | || | || ||| || || || |||||||||||
Sbjct 122 CGCTTCTGTAGCAATCCTCTCAAACAGGTCATTCACGAAGGAGTTCATGAT 172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7884531994758021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |