Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq269824 181 8e-40
seq180218 98.7 7e-15
>seq269824
Length=1075
Score = 181 bits (200), Expect = 8e-40
Identities = 405/605 (67%), Gaps = 6/605 (1%)
Strand=Plus/Plus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT- 282333
|| ||| ||| || || || | |||||| ||||||||||| ||| |||| ||
Sbjct 403 ACGTCAAAGGTGCCTCCGCCAAGATCAAAGATAAGTACATTGCGCTCTCC-TCTT--TTA 459
Query 282334 --TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|||||| | ||| || || | || || || || || || || || || |||| || |
Sbjct 460 CCTTTATCTAAACCGTAAGCGATGGCTGCTGCTGTGGGCTCGTTGATGATCCTCAGAATA 519
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| || || ||||| || ||||||||||| || || || || |||||
Sbjct 520 TTCAGCCCAGAGATCACCCCAGCATCCTTGGTGGCTTGTCTCTGAGAGTCATTGAAATAC 579
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511
|| ||||| || || || |||| | || | ||| | || || || | |
Sbjct 580 GCTGGAACTGTGATGACTGCATTAGACACCCTCTGTCCCAGGTAGGCTTCAGCAATCTCC 639
Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTT 282571
||||||||| | | ||| || || |||| |||||| | | ||| | || |
Sbjct 640 TTCATTTTAACCAGGACCATGGAAGAGATTTCCTCTGGATAGAAAGCCTTAGTCTCGCCT 699
Query 282572 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATAT 282631
| ||| ||| | | | |||||| | || | || || || || ||||||
Sbjct 700 TTATACTCTACCTGGACTTTTGGTTTTCCATTGTCACTGATCACCTTGAAAGGCCAAAGC 759
Query 282632 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 282691
||||| || || |||||| | || ||||| | ||| ||||| | ||||| ||||||
Sbjct 760 TTCATGTCAGAATGAACAACCGGATCGTTAAACTTTCTTCCAATGAGCCGTTTGGCATCA 819
Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751
|| || || ||||||||||| | || |||| | ||||| ||||||||||| ||
Sbjct 820 AAGATTGTGTTGGTTGGATTCATAGCCACTTGGTTCTTGGCAGCATCTCCAATGAGCCTC 879
Query 282752 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 282811
|| || || ||||| | ||||| ||||| || | ||||| |||||||| ||||||
Sbjct 880 TCAGTGTCAGTAAAGGCCACATAGCTGGGAGTGGTTCTGTTACCCTGATCATTGGCAATA 939
Query 282812 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 282871
|| || ||||| |||| || | || || |||||| | || || || | |||||||
Sbjct 940 ATCTCCACTTTGCCATGCTGGAAAACCCCAACACAAGAGTAGGTGGTGCCCAGATCAATA 999
Query 282872 CCAAT 282876
|||||
Sbjct 1000 CCAAT 1004
>seq180218
Length=724
Score = 98.7 bits (108), Expect = 7e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| ||||| ||||| |||| ||||||||||||||| ||||| || || | | |||
Sbjct 483 TTTTTGTCAAGGCCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATACGAAGGACA 424
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
||||| || | || | ||||| ||||| ||||| || | || || || || || ||
Sbjct 423 TTAAGTCCCGAGATGGTCCCTGCGTCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTAG 364
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480
|| || || || || || |||| ||||||
Sbjct 363 GCCGGCACGGTGATTACAGCATTTGTTAC 335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3725993035035414
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |