Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq40391 93.3 5e-14
seq282681 82.4 1e-10
seq169311 82.4 1e-10
seq129789 82.4 1e-10
seq68397 82.4 1e-10
seq6079 82.4 1e-10
>seq40391
Length=220
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||| |||||| ||| ||||| | ||| |||||||||||||||||
Sbjct 45 TCCTCGTTAGTATAGTGGACAGTATGTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 104
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 105 CCCGACGGGGAGG 117
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||
Sbjct 45 TCCTCGTTAGTATAGTGGACAGTATGTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 104
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 105 CCCGACGGGGAG 116
>seq282681
Length=1450
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721
|||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||||||
Sbjct 871 CGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCG 812
Query 8722 ACGAGGAG 8729
||| ||||
Sbjct 811 ACGGGGAG 804
>seq169311
Length=2236
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721
|||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||||||
Sbjct 2236 CGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCG 2177
Query 8722 ACGAGGAG 8729
||| ||||
Sbjct 2176 ACGGGGAG 2169
>seq129789
Length=334
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721
|||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||||||
Sbjct 334 CGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCG 275
Query 8722 ACGAGGAG 8729
||| ||||
Sbjct 274 ACGGGGAG 267
>seq68397
Length=4143
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721
|||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||||||
Sbjct 4143 CGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCG 4084
Query 8722 ACGAGGAG 8729
||| ||||
Sbjct 4083 ACGGGGAG 4076
>seq6079
Length=529
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721
|||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||||||
Sbjct 409 CGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCG 350
Query 8722 ACGAGGAG 8729
||| ||||
Sbjct 349 ACGGGGAG 342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 650411818802160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |