Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 145 7e-30
>seq285305
Length=1559
Score = 145 bits (160), Expect = 7e-30
Identities = 364/541 (67%), Gaps = 19/541 (4%)
Strand=Plus/Minus
Query 147082 GGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAAC 147141
|||||| | |||||||||||||||||| | || ||| | ||| ||| | | ||
Sbjct 1546 GGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGAGAGCCCGGGTAC 1487
Query 147142 GTAGTGTAGCTTCCGTCGCGCTGCG-CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTA 147200
|| |||| | |||| || | ||| ||| || ||||| ||||| || | | |||||
Sbjct 1486 GTCTCGTAGGTGCCGT-GCTCGGCGGCCAGATCGCAGCTCGCCTCCAGGGAAGCGTAGTA 1428
Query 147201 TATGGTTTCGGCGATTTGTTTGTTTAGGACGGTC-GCTTCTTCGCTCTCGTAAGGCATAC 147259
|| || || || || |||| || || | || ||| ||| || | || ||
Sbjct 1427 GATTGTCTCAAAAATCTGGATGTTGAGC-CGCTGAGCCTCTGGGCTTTCAAACGGGTAAC 1369
Query 147260 GCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC---GATGCT 147316
||| || | ||||| || ||||| || |||| ||||| ||||| || | || |||
Sbjct 1368 GCATCAGGATGAAGGCGTCCGCCAATCCTTGGACACCGATCCCGATCGGCCTGTGACGCT 1309
Query 147317 TTTCGT--TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTT 147374
| | | | || |||||| || | |||| ||| |||| || || ||||||||
Sbjct 1308 TGTTGGACTTCTCAGCTTCGGGCAC----TGGG-TAGAAGTTGATGTCGATGATCTTGTT 1254
Query 147375 GAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTC 147434
||||| | ||| | ||||| || | | ||||| | || ||| |||||| ||
Sbjct 1253 CAGGTTTCTCACAATTACTTTGGTCACTTGGGCCAGTTTTTTAAAGTCAAAAGTCCGCTC 1194
Query 147435 TTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTT 147493
| |||||| || ||| | ||||| ||||||||||| ||||| ||| ||| |
Sbjct 1193 AGGGGTGACGTAC--AT--GTTGAGAGCGATGGACGCCAGATTACAGACCGCCACCTCAT 1138
Query 147494 CGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAAT 147553
| | | |||| | || || || | ||| || || |||||||| ||| || | ||
Sbjct 1137 CCTGGCTGGTGTATTCAACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCGAGAT 1078
Query 147554 TTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCT 147613
| ||||| ||||| |||| ||||| ||||||||| |||||||||||||| ||||| |
Sbjct 1077 TCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCGGTTT 1018
Query 147614 C 147614
|
Sbjct 1017 C 1017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474834995168040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |