Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq285305 145 7e-30 >seq285305 Length=1559 Score = 145 bits (160), Expect = 7e-30 Identities = 364/541 (67%), Gaps = 19/541 (4%) Strand=Plus/Minus Query 147082 GGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAAC 147141 |||||| | |||||||||||||||||| | || ||| | ||| ||| | | || Sbjct 1546 GGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGAGAGCCCGGGTAC 1487 Query 147142 GTAGTGTAGCTTCCGTCGCGCTGCG-CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTA 147200 || |||| | |||| || | ||| ||| || ||||| ||||| || | | ||||| Sbjct 1486 GTCTCGTAGGTGCCGT-GCTCGGCGGCCAGATCGCAGCTCGCCTCCAGGGAAGCGTAGTA 1428 Query 147201 TATGGTTTCGGCGATTTGTTTGTTTAGGACGGTC-GCTTCTTCGCTCTCGTAAGGCATAC 147259 || || || || || |||| || || | || ||| ||| || | || || Sbjct 1427 GATTGTCTCAAAAATCTGGATGTTGAGC-CGCTGAGCCTCTGGGCTTTCAAACGGGTAAC 1369 Query 147260 GCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC---GATGCT 147316 ||| || | ||||| || ||||| || |||| ||||| ||||| || | || ||| Sbjct 1368 GCATCAGGATGAAGGCGTCCGCCAATCCTTGGACACCGATCCCGATCGGCCTGTGACGCT 1309 Query 147317 TTTCGT--TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTT 147374 | | | | || |||||| || | |||| ||| |||| || || |||||||| Sbjct 1308 TGTTGGACTTCTCAGCTTCGGGCAC----TGGG-TAGAAGTTGATGTCGATGATCTTGTT 1254 Query 147375 GAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTC 147434 ||||| | ||| | ||||| || | | ||||| | || ||| |||||| || Sbjct 1253 CAGGTTTCTCACAATTACTTTGGTCACTTGGGCCAGTTTTTTAAAGTCAAAAGTCCGCTC 1194 Query 147435 TTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTT 147493 | |||||| || ||| | ||||| ||||||||||| ||||| ||| ||| | Sbjct 1193 AGGGGTGACGTAC--AT--GTTGAGAGCGATGGACGCCAGATTACAGACCGCCACCTCAT 1138 Query 147494 CGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAAT 147553 | | | |||| | || || || | ||| || || |||||||| ||| || | || Sbjct 1137 CCTGGCTGGTGTATTCAACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCGAGAT 1078 Query 147554 TTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCT 147613 | ||||| ||||| |||| ||||| ||||||||| |||||||||||||| ||||| | Sbjct 1077 TCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCGGTTT 1018 Query 147614 C 147614 | Sbjct 1017 C 1017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474834995168040