Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq257969 98.7 3e-17
seq210383 98.7 3e-17
seq145068 98.7 3e-17
seq109211 98.7 3e-17
seq21041 98.7 3e-17
seq51892 96.9 1e-16
seq297654 95.1 4e-16
seq82651 95.1 4e-16
seq75491 95.1 4e-16
seq13066 87.8 6e-14
>seq257969
Length=520
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 518 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 459
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 458 GGTTTCGGC 450
>seq210383
Length=1493
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 828 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 769
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 768 GGTTTCGGC 760
>seq145068
Length=508
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 377 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCCATC 436
Query 2829 CCGGGCTTC 2837
||||| |||
Sbjct 437 CCGGGTTTC 445
>seq109211
Length=3988
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 917 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 858
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 857 GGTTTCGGC 849
>seq21041
Length=6940
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 283 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 224
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 223 GGTTTCGGC 215
>seq51892
Length=239
Score = 96.9 bits (106), Expect = 1e-16
Identities = 61/65 (94%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 2763 TTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
|||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 66 TTTATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGG 7
Query 2822 TTCAA 2826
|||||
Sbjct 6 TTCAA 2
>seq297654
Length=9074
Score = 95.1 bits (104), Expect = 4e-16
Identities = 63/70 (90%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 8905 TGGCGAAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 8964
Query 2827 CCCCGGGCTT 2836
|||||| ||
Sbjct 8965 TCCCGGGTTT 8974
>seq82651
Length=611
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||| | |
Sbjct 112 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTAAAGATCTAAAGGTCCCTGGTTCGATC 53
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 52 CCGGGTTTCGGC 41
>seq75491
Length=310
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 244 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 303
Query 2829 CCGGG 2833
|||||
Sbjct 304 CCGGG 308
>seq13066
Length=286
Score = 87.8 bits (96), Expect = 6e-14
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
|| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 82 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15797916113655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |