Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq100944 95.1 1e-14
>seq100944
Length=4962
Score = 95.1 bits (104), Expect = 1e-14
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 87329 CTGCTCCCAGTTTACTAAAATCTTTCTTAGATTGAAATGTATAGACTGTCAAGCCAGCAA 87388
||||||||| ||| || || ||| |||| || || || || ||| |||||| |||||||
Sbjct 3241 CTGCTCCCATTTTGCTGAAGTCTCTCTTGGACTGGAAGGTGTAGGCTGTCAGTCCAGCAA 3300
Query 87389 ACACAGCACATGTTaaaaaaaGCGATTGTAGTATGGTGGAGTATTCATAGAAGGT 87443
|||||||||| || | || | | ||| || | ||||||||||||||||||||
Sbjct 3301 ACACAGCACAGGTCAGGAACAAGGCTTGCAGCACAGTGGAGTATTCATAGAAGGT 3355
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 87073 TTTTATTGGTTCTTTATAGATTTTAGTATATGCAATATGCGCATAAAGAGATCGATAATA 87132
||| | || ||||| || || | || | | ||| ||| ||| || |||| || |||
Sbjct 1298 TTTCAGTGTTTCTTCATTGAGTCGAGGAGACGCAGGATGTGCAGGAACAGATTGACGATA 1357
Query 87133 TCCATGTAAATGTGGATAAATGCTACAATGTATTCGTCAGGAGAAAACTGTTTCATTAGC 87192
|||| || | || ||| | || | |||| || ||||| || | ||| ||||| |||
Sbjct 1358 TCCAGATAGAGGTTGATGGAAGCCAGGATGTGCTCCTCAGGGGAGAGCTGCTTCATCAGC 1417
Query 87193 TTATGGGTGTCATAAATTATAAAGCCACAGAAAACAACAGCCCCAAACCCAGAAATAACT 87252
||||||||| || || |||||||||||||| | ||| ||| |||| | ||||
Sbjct 1418 AGGCTGGTGTCATAGATGATGAAGCCACAGAAAACTAGAGCTCCAGCTCCAGCCAGAACT 1477
Query 87253 AAATCTGCGCTATCACTGTT 87272
| |||| ||| ||||| ||
Sbjct 1478 AGCTCTGTGCTGTCACTTTT 1497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396011816174695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |