Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq211158 114 1e-20 >seq211158 Length=742 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || ||||| |||||||| || || || ||| ||||||| || |||||||| | Sbjct 385 GACCTGCCTCTCATGGCGCTGCCTCCATGTCACGCCCTCTGTCAGTTCTACGTGCATGAC 444 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| || ||||| || || || || || || ||||| | || ||||| ||| Sbjct 445 GGCGAGCTGTCATGTCAGCTGTACCAGCGCTCAGGCGATATGGGTCTGGGAGTGCCTTTC 504 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| || || || ||||||||||| || Sbjct 505 AACATCGCCAGCTACGCACTTCTTACCTACATGATCGCACA 545 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || ||||| || || |||||||| ||||| || | ||| Sbjct 545 TGTGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATGTTGAAAGGCACTCCCAGACCC 486 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || || || || || || ||||| || |||||||| || | |||||||| || Sbjct 485 ATATCGCCTGAGCGCTGGTACAGCTGACATGACAGCTCGCCGTCATGCACGTAGAACTGA 426 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||| || || || |||||||| ||||| || || Sbjct 425 CAGAGGGCGTGACATGGAGGCAGCGCCATGAGAGGCAGGTC 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446591843704080