Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq211158 147 2e-30 seq90574 102 7e-17 seq90573 102 7e-17 >seq211158 Length=742 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||| || || || | ||||||||||||||| || ||| Sbjct 557 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 498 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||| || ||||| | |||||| ||||| || || ||||| ||||| | Sbjct 497 ACTCCCAGACCCATATCGCCTGAGCGCTGGTACAGCTGACATGACAGCTCGCCGTCATGC 438 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCT 29887 ||||| |||||||| | ||| || || ||||| || ||||||||| || |||| Sbjct 437 ACGTAGAACTGACAGAGGGCGTGACATGGAGGCAGCGCCATGAGAGGCAGGTCT 384 >seq90574 Length=499 Score = 102 bits (112), Expect = 7e-17 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || ||||||||||||||||| | ||| | ||||| ||| |||||| ||||| || ||| Sbjct 269 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 328 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 114384 ||||| ||||| ||||| || ||||| |||||||| ||||| Sbjct 329 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 369 >seq90573 Length=6224 Score = 102 bits (112), Expect = 7e-17 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || ||||||||||||||||| | ||| | ||||| ||| |||||| ||||| || ||| Sbjct 231 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 172 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 114384 ||||| ||||| ||||| || ||||| |||||||| ||||| Sbjct 171 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 131 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 114042 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAATGTCGCACGCAA 114101 |||||| || |||||||||| | || || || | || ||||| || |||| ||| ||| Sbjct 1498 ACTCTGCCAATAGACGATATTTGTCCAGGCTGATTTCAGGGAGGAACGTGTCACACTCAA 1439 Query 114102 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTCC 114160 | ||| || | || ||||| ||||| ||| | ||||||||||||||||| | |||| Sbjct 1438 ACTGCTTCAGGATTTGTGTGACGAACAGTCTCCTGGTCCCCGGGCTCTCCATAAACTCC 1380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404687377962154