Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq211158 147 2e-30
seq90574 102 7e-17
seq90573 102 7e-17
>seq211158
Length=742
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
||||| |||| ||| || |||||||| || || || | ||||||||||||||| || |||
Sbjct 557 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 498
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||| || ||||| | |||||| ||||| || || ||||| ||||| |
Sbjct 497 ACTCCCAGACCCATATCGCCTGAGCGCTGGTACAGCTGACATGACAGCTCGCCGTCATGC 438
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCT 29887
||||| |||||||| | ||| || || ||||| || ||||||||| || ||||
Sbjct 437 ACGTAGAACTGACAGAGGGCGTGACATGGAGGCAGCGCCATGAGAGGCAGGTCT 384
>seq90574
Length=499
Score = 102 bits (112), Expect = 7e-17
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| ||||||||||||||||| | ||| | ||||| ||| |||||| ||||| || |||
Sbjct 269 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 328
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 114384
||||| ||||| ||||| || ||||| |||||||| |||||
Sbjct 329 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 369
>seq90573
Length=6224
Score = 102 bits (112), Expect = 7e-17
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| ||||||||||||||||| | ||| | ||||| ||| |||||| ||||| || |||
Sbjct 231 TTGAGCTCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAAAGGTCTGTTCTTCTCTGGG 172
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTG 114384
||||| ||||| ||||| || ||||| |||||||| |||||
Sbjct 171 ATGGAAAACCACGTCTTCCTGCCCATGATCACCACATTCTG 131
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 114042 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAATGTCGCACGCAA 114101
|||||| || |||||||||| | || || || | || ||||| || |||| ||| |||
Sbjct 1498 ACTCTGCCAATAGACGATATTTGTCCAGGCTGATTTCAGGGAGGAACGTGTCACACTCAA 1439
Query 114102 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTCC 114160
| ||| || | || ||||| ||||| ||| | ||||||||||||||||| | ||||
Sbjct 1438 ACTGCTTCAGGATTTGTGTGACGAACAGTCTCCTGGTCCCCGGGCTCTCCATAAACTCC 1380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404687377962154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |