Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq178749 95.1 1e-14
seq52848 91.5 1e-13
>seq178749
Length=757
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||||||| || || ||||| || || || | ||||||||| | |||||||| ||
Sbjct 310 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCTCTTCTTC 369
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || ||||| || || ||||| ||||| || || || || ||||| || ||
Sbjct 370 AGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATCCCCTCCACAGCGGCGAAGGCC 429
Query 4692 AC 4693
||
Sbjct 430 AC 431
>seq52848
Length=1214
Score = 91.5 bits (100), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 1/129 (1%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| || ||||||||||| || |||||| | || | || ||||||| |||||||| ||
Sbjct 224 TCATCCCTGCTAATCAGCTCATTAGAATAGGTGAGACCCGGCATTAGGCCTCTCTTCTTT 165
Query 4632 AGCCAAAATATAGCGGCAAA-TGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGC 4690
|||||| | || || ||||| || ||||| ||||| ||||| || || || ||||| ||
Sbjct 164 AGCCAATAAATGGCAGCAAACNGAGCCAGAGAAGAAGATGCCCTCCACCGCTGCAAAAGC 105
Query 4691 TACTAATCG 4699
|| | |||
Sbjct 104 CACGATTCG 96
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425497885785287
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |