Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq214408 143 2e-29
seq211158 134 1e-26
seq175470 116 3e-21
>seq214408
Length=843
Score = 143 bits (158), Expect = 2e-29
Identities = 178/244 (73%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 69074 GGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTA 69133
||||||||||||| | || || || | ||| | || |||||||| | |||
Sbjct 502 GGTGAACGGATGGAGCAACTTCTACCTTCCCGAGACAGTACACATGCAGGTTGTAGGTGT 443
Query 69134 TGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAA 69193
||| ||| ||| | | || ||||||||||||||| |||||||||| |||||| | ||
Sbjct 442 GGTGGAGGGCACTTCCTGCCCATGTGACCAGCTTGTTGTGATGACCTGTGAGGACAAAAA 383
Query 69194 GGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGG 69253
| | |||| ||| || ||||| |||||||||||||||||| | | || ||| |
Sbjct 382 GATTTACGCCTACGATGGAGAGGAGCTGCATGTGGTGGCTTCAAGCTTAGAGCAGCTATT 323
Query 69254 GGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACA 69313
| |||||||| | ||||| |||| | ||||||||| | ||||||||||||||| |
Sbjct 322 TAAGGAAGGAATTGAGTATCCAGCATCCAAGAGCTATTGCAAGGGGGAGGCCTTCAAAGA 263
Query 69314 TATG 69317
||||
Sbjct 262 TATG 259
>seq211158
Length=742
Score = 134 bits (148), Expect = 1e-26
Identities = 128/164 (78%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
||||| |||| ||| || |||||||| || || || | ||||||||||||||| || ||
Sbjct 557 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 498
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||| || || || | |||||| |||||||| || ||||| || ||
Sbjct 497 ACTCCCAGACCCATATCGCCTGAGCGCTGGTACAGCTGACATGACAGCTCGCCGTCATGC 438
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
||||| |||||||| | |||||| || ||||| || ||||||||
Sbjct 437 ACGTAGAACTGACAGAGGGCGTGACATGGAGGCAGCGCCATGAG 394
>seq175470
Length=1276
Score = 116 bits (128), Expect = 3e-21
Identities = 203/292 (70%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 69030 ATAGGACCCGTTGAGGACACAGAGTATAAAGACAGGCCTGCAGTGGTGAACGGATGGGGA 69089
|||||| | |||| ||||| || | ||||| || | |||||| | |||||||
Sbjct 797 ATAGGAGGCCTTGAAGACACCATTTACAGAGACAAAGATGACGAGGTGAATGCATGGGGA 738
Query 69090 AAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTATGTGACGGGAACTCCA 69149
|| || ||| | |||| | || |||||||| | ||| ||| ||| ||
Sbjct 737 AAATTCTATCTTCCCAAGACGGTACACATGCAGGTTTTAGGTGTGGTGGAGGGCACCTTG 678
Query 69150 TACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGAC 69209
| |||||||||||||| ||||||||||| |||||| | ||| | |||| |||||
Sbjct 677 TGTGCGTGTGACCAGCTTGTTCTGATGACCTGTGAGGACAAAAAGCTTTACGCTTATGAT 618
Query 69210 GGAGACGAGCTGCATGTGGTGGCTAACTGTCTGG-ATCAGATGGGGGAA---GAAGGAAT 69265
||||| || ||||| |||||||| | |||| | | | | | ||| ||| |||
Sbjct 617 GGAGAGAAGATGCATTTGGTGGCT-TCAAGCTGGCAGCGGCTAGATGAAATTAAAGAAAT 559
Query 69266 AGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317
|| ||||| |||| | |||||||||| | |||||||||||| || |||||
Sbjct 558 AGAATATCCAGCATCCAAGAGCTATTACAAGGGGGAGGCCTTCCAAGATATG 507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 368164570069709
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |