Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq209621 132 7e-26
seq123391 127 3e-24
>seq209621
Length=1424
Score = 132 bits (146), Expect = 7e-26
Identities = 165/222 (74%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 9227 TGGTT-TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCT 9285
||||| || || || |||||||||| || |||||||| || ||||| || |||
Sbjct 654 TGGTTCTCACCTATGATGATGAGTCTGGTAGTCTGGAAGAGCTGCTCATCGTCCCAGGTG 595
Query 9286 GGATGTTCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCG 9345
||||||||||| ||||| || || || || |||||||| ||||| ||||| || ||||||
Sbjct 594 GGATGTTCTTGCTTCAGGACGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCG 535
Query 9346 TACATCATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTT 9405
||||| |||| || || | || |||||| ||| ||||||| ||||||||| || |
Sbjct 534 TACATGGTGAGGCCCGGCAGCATGCCAAAGAACTCCTGACCGATGGCCAGACGC-TGCTC 476
Query 9406 TCG-GGCACTTCGGGAGGATAGATCATGTGCACCTGGACGTC 9446
| | || | | |||||| | ||||||||| |||| ||
Sbjct 475 TGGAGGGATGTTTTCAGGATAAACCATGTGCACAGGGACTTC 434
>seq123391
Length=1400
Score = 127 bits (140), Expect = 3e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
||||||| |||| |||| ||| || || || | ||| | | |||||||| |
Sbjct 1291 GGACACCACTTGGTGTTGAGACACACCAGTTTCTTCAAAGTGGAAGTTTTGACGATATTG 1232
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||| || || || || |||||||||||||||||| | ||||||||||| |||
Sbjct 1231 AAGCCCGTCTCGCCCCCAAAAGTGCTGGGCTTCCAGTACTCAGGGGAGCAGATAGGGTTT 1172
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||| |||||||| |||||||| ||||| |||| ||| | || |||||||| || ||
Sbjct 1171 CCCATCAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCAACCATACTCTCACCAAATATA 1112
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTC 8535
| || ||||||| || |||| |||| || | ||| | ||| | ||| ||
Sbjct 1111 GTGTGAGGACGGGTTTTCTCCAGTAAGATGCCCGGGTAGAACTCTAAAGCATC 1059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 714205188346560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |