Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq209621 132 7e-26 seq123391 127 3e-24 >seq209621 Length=1424 Score = 132 bits (146), Expect = 7e-26 Identities = 165/222 (74%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 9227 TGGTT-TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCT 9285 ||||| || || || |||||||||| || |||||||| || ||||| || ||| Sbjct 654 TGGTTCTCACCTATGATGATGAGTCTGGTAGTCTGGAAGAGCTGCTCATCGTCCCAGGTG 595 Query 9286 GGATGTTCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCG 9345 ||||||||||| ||||| || || || || |||||||| ||||| ||||| || |||||| Sbjct 594 GGATGTTCTTGCTTCAGGACGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCG 535 Query 9346 TACATCATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTT 9405 ||||| |||| || || | || |||||| ||| ||||||| ||||||||| || | Sbjct 534 TACATGGTGAGGCCCGGCAGCATGCCAAAGAACTCCTGACCGATGGCCAGACGC-TGCTC 476 Query 9406 TCG-GGCACTTCGGGAGGATAGATCATGTGCACCTGGACGTC 9446 | | || | | |||||| | ||||||||| |||| || Sbjct 475 TGGAGGGATGTTTTCAGGATAAACCATGTGCACAGGGACTTC 434 >seq123391 Length=1400 Score = 127 bits (140), Expect = 3e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||||| |||| |||| ||| || || || | ||| | | |||||||| | Sbjct 1291 GGACACCACTTGGTGTTGAGACACACCAGTTTCTTCAAAGTGGAAGTTTTGACGATATTG 1232 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||| || || || || |||||||||||||||||| | ||||||||||| ||| Sbjct 1231 AAGCCCGTCTCGCCCCCAAAAGTGCTGGGCTTCCAGTACTCAGGGGAGCAGATAGGGTTT 1172 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| |||||||| |||||||| ||||| |||| ||| | || |||||||| || || Sbjct 1171 CCCATCAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCAACCATACTCTCACCAAATATA 1112 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTC 8535 | || ||||||| || |||| |||| || | ||| | ||| | ||| || Sbjct 1111 GTGTGAGGACGGGTTTTCTCCAGTAAGATGCCCGGGTAGAACTCTAAAGCATC 1059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714205188346560