Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq200202 87.8 4e-12 >seq200202 Length=1384 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/106 (79%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || ||||| |||||||| || || || ||||| || ||||||||||||| ||| || | Sbjct 401 CAGATTTTTGTGAAAACACTGACGGGTAAAACCATTACCCTCGAGGTGG--AGCCCAGTG 458 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| |||||||| |||||| || || || ||||||||||| || Sbjct 459 ACACTATCGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTAT 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1199133060041966