Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq12 116 5e-21 >seq12 Length=13897370 Score = 116 bits (128), Expect = 5e-21 Identities = 181/254 (71%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||||||||||||| | ||| || || |||| || | || Sbjct 3432187 GAACTTCTCGAAGTTCCAGGCCACGTCGTTTCTGCAGACCGGGCTCCAGATGATTAACTT 3432246 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 ||||||| | | || | | ||||||||||| || || ||||| ||||| Sbjct 3432247 GGGGTCGTTTATCAGGGCGGAAGGCTCGTCGCTAGGGAAGGGGAGCTTCTCTCTCAGGAA 3432306 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCAC-TTCTCGAAGAGCATAAA 83319 |||| || ||||| || |||| ||||| || || ||| ||||| | |||| ||| Sbjct 3432307 CACGAACAGAGGATGAGCGTCCTT--CCCGTTCACATC-CACTTTCTCCAGGAGCTGAAA 3432363 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 || ||||| || || || ||||| ||||| | |||||| || ||| ||| || |||| Sbjct 3432364 CTTGGGCTCAAAACCATTTCCAGGGCGGACATACTTCAGAGACTGCAGGATTTCATCATT 3432423 Query 83380 CTGGGCGTTTTCCT 83393 || | ||| |||| Sbjct 3432424 CTTGCAGTTCTCCT 3432437 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || ||||||||||| || || | ||| || | || |||||| | | | | || Sbjct 3433458 CCTGATGGCCGAACTGGTTGCAGGGCACCCCCAGGATCACGAGCCCCTGGCCGGCGAAGC 3433517 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || | || |||||||||||||| ||||| |||| | || | |||||||| ||||| | Sbjct 3433518 GCTGGTGGAGCTCGTTCATCTGGGTGTAATCCCTGGTGGTCGTTCCTCAGAGAGACGCCA 3433577 Query 83511 CGTTCTCGATGAG 83523 | ||||||||||| Sbjct 3433578 CATTCTCGATGAG 3433590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608724315131000