Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 >seq7 Length=16146599 Score = 131 bits (144), Expect = 1e-25 Identities = 146/193 (76%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||||||||| || ||| |||| |||| ||||||||| ||||| Sbjct 1869733 TCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAG 1869674 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 ||||| ||||||||||| || | || ||| ||||| || ||||| ||| | || Sbjct 1869673 ATGAGACGCTGCTGGTCTGGAGGGATGCCCTCTTTGTC--CTGGATTTTGGCCTTAACAT 1869616 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | ||||| |||| |||||||| |||||||| || ||||||| Sbjct 1869615 TTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCA 1869556 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 1869555 CAAAGATCTGCAT 1869543 Score = 114 bits (126), Expect = 8e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || || |||||||||||||| ||| | || |||| ||||||||| ||||| Sbjct 1869961 TCTTTTTGGATATTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 1869902 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || |||| ||||||||| || | || ||||| || ||| || ||||| | || Sbjct 1869901 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATC-TTAGCTTTGACATT 1869843 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | | ||||| |||| |||||||| ||||| ||||| || ||||| Sbjct 1869842 CTCAATGGTGTCGCTGGGCTCGACCTCCAGAGTGATGGTCTTGCCTGTGAGGGTCTTCAC 1869783 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 1869782 AAAGATCTGCAT 1869771 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || ||||| ||| |||| |||| ||||||||| || ||| Sbjct 1869505 TCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAA 1869446 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || |||| ||||||||| || | || ||||| || ||||| ||||| | || Sbjct 1869445 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTA-GCTTTGACATT 1869387 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | || | | ||||| |||| |||||||| || || || || || ||||| Sbjct 1869386 CTCAATGGTGTCACTGGGCTCGACCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCAC 1869327 Query 34378 AAAGATCTGCATC 34390 ||||||||||||| Sbjct 1869326 AAAGATCTGCATC 1869314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323034495884000