Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq14 116 8e-21 >seq14 Length=13523219 Score = 116 bits (128), Expect = 8e-21 Identities = 394/610 (65%), Gaps = 9/610 (1%) Strand=Plus/Plus Query 248802 CGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCT 248861 || || |||||| ||| | ||||||| ||||| || |||||| || || | || Sbjct 9105660 CGACAGAGATTTCTCCTACAACTTCTTTGGCTTCAAGACTCTGGAGCGTTCCTACTTGCT 9105719 Query 248862 CAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGG 248921 || || | ||||| | | || || ||||||||| | ||| |||||||||| || Sbjct 9105720 GAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGAGTGGCTGTTGG 9105779 Query 248922 GATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACC--GGAATGAGTGAACGC 248979 || ||||| | || || || ||||||| |||| | | | || ||| Sbjct 9105780 TATCCACAAAACAGCTATCGACGCCGCCATCGAGACCTACAACCTGCTCTCAGAGAAG-- 9105837 Query 248980 TGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGC 249039 ||| | || || || | || |||||||||||||| || ||| || ||||||| | Sbjct 9105838 TGGTTCACCCACGCGTCTCCTACGCTCTTCAACGCAGGAACCAACAGGCCTCAGCTGTCC 9105897 Query 249040 TCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAA 249099 ||||| || || ||||| | || ||| |||||||||||||||||||||| || Sbjct 9105898 AGCTGCTTCCTGCTCACCATGAAGGATGACAGCATCGACGGCATTTATGACACGCTGAAG 9105957 Query 249100 CAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGA 249159 ||| || || || || | || || |||||||| | | ||| | |||| || Sbjct 9105958 CAGTGTGCCCTCATCTCCAAGTCAGCTGGAGGAATCGGCGTGGCGGTCAGCTGCATCAGA 9106017 Query 249160 GCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTT 249219 | | ||| ||||| || || || || | | || | || ||| | || Sbjct 9106018 TCAACGGGGAGCTACATTGCTGGCACCAACGGCAACTCAAACGGGCTGGTCCCCATGCTG 9106077 Query 249220 CGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG----GGGTC 249275 || || | ||| || | | || |||||| | ||| | | || ||| | Sbjct 9106078 AGAGTCTACAACAACACGGCGCGCTATGTCGACCAGGGC-GGCAACAAGAGACCCGGGGC 9106136 Query 249276 GTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAA 249335 ||||||||||| |||| |||||| || | || || |||||||| |||| || Sbjct 9106137 CTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAA 9106196 Query 249336 GAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGA 249395 ||||| || || ||| ||||| | || || ||||||||| ||||| || |||| Sbjct 9106197 GAACACAGGGAAGGAGGAGCAAAGAGCCAGAGATCTTTTCTACGGCTTGTGGATCCCCGA 9106256 Query 249396 CTTGTTCATG 249405 |||||||||| Sbjct 9106257 CTTGTTCATG 9106266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073635358555200