Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq7 125 6e-24 >seq7 Length=16146599 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||| | || |||| || || ||| ||| ||||| |||||||||||| Sbjct 1869769 CCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 1869710 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| ||||| || || |||||||| || | ||||| ||||| ||||| Sbjct 1869709 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1869650 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| |||||| ||||| |||||| | | | |||| | ||| ||| Sbjct 1869649 ATGCCCTCTTTGTCCTGGATTTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCGACC 1869590 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| ||||| || ||||||||||| ||||| Sbjct 1869589 TCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||| || ||| ||| |||| |||| Sbjct 1869522 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCGTCTTCCA 1869463 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || || || |||| || ||| ||||| ||||| | || ||||| ||| | Sbjct 1869462 GCTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 1869403 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || || || | | | | |||| | ||| ||||||| || || ||||| | Sbjct 1869402 TCTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCCAAAGTGATGGTCTTAC 1869343 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | ||||| |||||||||||||| ||||| ||| Sbjct 1869342 CAGTCAGGGTCTTCACAAAGATCTGCATCTTG 1869311 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||| || || || ||||||||| ||| ||| | || |||| Sbjct 1869978 CAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCGGACAGGGTGCGGCCATCTTCCA 1869919 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || ||||| |||| || ||| ||||| ||||| | || ||||| ||| | Sbjct 1869918 GCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 1869859 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || || || | | | | |||| | ||| ||||||| || || ||||||| Sbjct 1869858 TCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCCAGAGTGATGGTCTTGC 1869799 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || |||||||||||||| ||||| Sbjct 1869798 CTGTGAGGGTCTTCACAAAGATCTGCAT 1869771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395029337325025