Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq14 499 4e-136 >seq14 Length=13523219 Score = 499 bits (552), Expect = 4e-136 Identities = 1304/1976 (66%), Gaps = 25/1976 (1%) Strand=Plus/Minus Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146 |||||||||||| | || || | | || || ||||| || |||| | | ||| Sbjct 9107250 CTGAATGGATCCGTTGTGAGCGATCAGCTGGTTTTTCATCTCCTCGCTCCACAGTCCTCT 9107191 Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206 ||| || | || | || ||||| || || || | ||||| ||||| |||| || || Sbjct 9107190 CTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCGGACAGGACCCT 9107131 Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266 || ||||| || || ||||| || | || | ||||| || || |||| || || || Sbjct 9107130 GCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 9107071 Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326 || || || || ||||| || |||| || | || || || | |||| | ||| Sbjct 9107070 GGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGAT 9107011 Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 65386 || || || || | | ||| | ||| || || | || | | Sbjct 9107010 CTTTTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTGGG--CGTCTTCTCCCACATGTCG 9106953 Query 65387 T--TGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTT 65443 | || || || || || ||| | | || | ||| | ||||| ||||| || || || Sbjct 9106952 TACTGGAGGATGCCCTTGCTGACAGGAC-AGCCTTCGTATGTCTCGTAGGGGCCCAACTC 9106894 Query 65444 CTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTT 65503 | || || || || |||||||| | || |||| || ||||| || ||||||| | Sbjct 9106893 GGCTGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGAT 9106834 Query 65504 ATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGC 65563 || || || || || |||| ||||| || ||| | || || || ||||| || Sbjct 9106833 GTTCAGCAGCTGAGCCTCTGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGC 9106774 Query 65564 TAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGG 65623 || || || || || || || || || || || | ||| || || | ||||| || || Sbjct 9106773 CAAACCCTGGACGCCGATTCCAATTGGCCTGTGGCGCTTGTTGGACTTATCAGCCTCGGG 9106714 Query 65624 AATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCAC 65683 | || || || ||||| ||||| || || || || || |||| || |||||| ||| Sbjct 9106713 CACTGGGTAGTAGTTAATCTCTATGATCTTGTTCAGGTTCTTGACGATAACTTTGGTCAC 9106654 Query 65684 ATCCTTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAAC 65740 | || |||||| || ||||| ||||| | || ||||||| | || | Sbjct 9106653 AGACTCCAGTTTTTTGAAGTCAAAAGTCCGCTCGGGGGTGACGTACATGTTGAGAGCGAT 9106594 Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800 || ||||||||||| ||||| ||||||| || | |||| | || || ||||| Sbjct 9106593 GGAGGCCAGATTACAGACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTGCA 9106534 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 || || || || |||||||| || | ||| ||||| || ||||| |||| || || || Sbjct 9106533 GAGGTTGCTGCATTTGATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTC 9106474 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA- 65919 || || || ||| | || ||||| || || |||| || || || | || | ||| | Sbjct 9106473 TTTGTACAGCATGTACGGTGTACCCGTCTCCGTCTGGGACTCGATGACGGCGTGCCACAG 9106414 Query 65920 CGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATA----GTGTATAC 65975 | || ||||||| | | | ||| | | ||| ||| ||| ||||| | Sbjct 9106413 CTGCT-GAGCCTTCACAACACGCTTGACCCGCCC--CTCCTTCTCATACTGGGTGTAGAG 9106357 Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035 || || ||||| || ||||| | ||||| || || || || ||||||||| Sbjct 9106356 CTTC--TCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTGGGACACATC 9106299 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095 | ||||| || || || |||| ||||| || | || || ||||| | ||| Sbjct 9106298 AGAGACCAGTCCTGGTTGCTCTCGACTCTCTTCATGAACAAGTCGGGGATCCACA-AGCC 9106240 Query 66096 ATAAATAA-ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 || | || |||||||| ||| || ||||| || ||||| ||||| || || || ||||| Sbjct 9106239 GTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAA 9106180 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | | | ||| | ||||| || |||| ||| ||||| | | || || | ||||| Sbjct 9106179 GTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTT 9106120 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 || ||||| || | || | || ||||| || || ||||||| ||| || | | || Sbjct 9106119 GCCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGCCC 9106060 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 || || | || ||||| || | || ||||| || ||| | || || | | Sbjct 9106059 GTTTGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCGTTGATCTGATGCAGCTGACCGC 9106000 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | || ||||| || || || ||||| | || || | || | ||| ||||| || Sbjct 9105999 CACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATAAAT 9105940 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454 ||| || || || |||||| ||||| | || || || ||||| |||| || | | | Sbjct 9105939 GCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 9105880 Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 ||||| || || || | |||||||| ||||| || ||||| || || || || || || Sbjct 9105879 GGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTGAACCACTTCTCTGAGAGCAGGTT 9105820 Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574 ||| ||||| || || | ||| ||| | || || || || || || || | ||| | Sbjct 9105819 GTAGGTCTCGATGGCGGCGTCGATAGCTGTTTTGTGGATACCAACAGCCACTCTCATGAG 9105760 Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 66634 ||||||||| || | || | | ||| ||| || |||| ||||||||| |||| Sbjct 9105759 CATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAAGTAGGAACGCTCCAG 9105700 Query 66635 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||| || || ||||| ||||||| || || |||| ||| |||| || |||||||||| Sbjct 9105699 AGTCTTGAAGCCAAAGAAGTTGTAGGAGAAATCTCTGTCGAAAATGATGGCCGAGTTGAG 9105640 Query 66695 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAA-ATAATCGGAGAATGTT 66753 || || | || ||| | || | ||| | |||| | || || || || || Sbjct 9105639 GCGGTCTTTGTTTTCAAGAACGATGTCGAGGGTC-TCCTTGGAGATCATAGGGGAGTGGC 9105581 Query 66754 TCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 66813 | ||| ||| ||||| |||||||| | ||||||||||| ||||| || | ||| | Sbjct 9105580 GTCTATTCAGAGGGTTGACGTAGTTGAACAGGTCCTCCATCACCTCACTGAACACTTTCT 9105521 Query 66814 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGAT 66873 |||| || ||||| || || || ||||| || | || || | |||||||| || || | Sbjct 9105520 TTGTCTCCTTGTGCAGGTTGGAGACGGCGATCCGTGCAGCGAGGATGGCATAGTCTGGGT 9105461 Query 66874 GTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTA 66933 ||| || || ||||| || || || || ||||||||||| | || || || || | Sbjct 9105460 GTTTGGTCGTGAGGGTGGCAGCGATCTCTGCAGCCAGAGTGTCGAGCTCCACTGTGGTGA 9105401 Query 66934 CTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAG 66993 | ||| | || | || ||||| |||||||| | || | | | ||||| | |||| Sbjct 9105400 CACCACTGTACAGACCCTGGATCACCTTCATTGTGATCTGAGTTGGATCCACGAAGTCAG 9105341 Query 66994 TGTTTAAGCCATAACATAATTTTCTA-ATACGAGATGTGATTTTATCAAACATGAC 67048 ||| | ||||| || || |||| |||||||| ||||||||||| |||||||| Sbjct 9105340 AGTTCAGCCCATAGCA-AAGCTTCTGGATACGAGAGGTGATTTTATCGAACATGAC 9105286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658094436301000