Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq13 122 7e-23 >seq13 Length=13670824 Score = 122 bits (134), Expect = 7e-23 Identities = 127/164 (77%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| ||||||| ||||||||||| || || || || |||||||||||||| || || | Sbjct 11903249 TCAGTCCCGTGATGTGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAG 11903190 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC-CCCCCGA 21107 |||| || || ||||| || | || | |||||||||||| || |||||||| || ||| Sbjct 11903189 GGACGCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGA 11903130 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 |||||| ||||| || | |||| || || || |||||||| Sbjct 11903129 -TCACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCAT 11903087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427726341222000