Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2158 165 6e-36 seq57 165 6e-36 >seq2158 Length=12508 Score = 165 bits (182), Expect = 6e-36 Identities = 215/295 (73%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 91811 TTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAG 91869 || |||||||| ||||||| || ||||||| ||||| | | | ||| || |||| || Sbjct 11727 TTCTCCTGCAAGGAGGACTGCAGGATCATCACAGACACCGCC-GCCAAGCTCGAACGCAG 11669 Query 91870 TGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGC 91929 |||||||||||||| || ||||||| ||||| || |||| |||||||| || | | Sbjct 11668 CGGCTTCTACTGGGGCCCCCTGGGGGTGGAGGACGCCCATCACATGCTGCGGGACGCACC 11609 Query 91930 ACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTA 91989 |||||||||| |||||| || || || | || || ||| |||| ||||| ||||| || Sbjct 11608 GCTGGGCAGCTATCTCATCCGAGACAGTCGACAGAAAGACATCTTCTTCACACTGTCCTA 11549 Query 91990 TCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTT 92049 ||| | || ||| || ||||||||| | || || |||||| | || | || || || Sbjct 11548 CCACGCCAAGAGCGGGCCGGTCAGTGTGCGCATCGACTACAAGCAGAAAAAGTTCTCATT 11489 Query 92050 GGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACCATTACATC 92104 ||| || | | | | ||| | || || || ||||||||| ||||||||| Sbjct 11488 GGCGGGCAACGAGCGCTCGTTCCAAACGCTCTTTGCCCTGTTGGAGCATTACATC 11434 >seq57 Length=1322981 Score = 165 bits (182), Expect = 6e-36 Identities = 215/295 (73%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 91811 TTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAG 91869 || |||||||| ||||||| || ||||||| ||||| | | | ||| || |||| || Sbjct 198762 TTCTCCTGCAAGGAGGACTGCAGGATCATCACAGACACCGCC-GCCAAGCTCGAACGCAG 198820 Query 91870 TGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGC 91929 |||||||||||||| || ||||||| ||||| || |||| |||||||| || | | Sbjct 198821 CGGCTTCTACTGGGGCCCCCTGGGGGTGGAGGACGCCCATCACATGCTGCGGGACGCACC 198880 Query 91930 ACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTA 91989 |||||||||| |||||| || || || | || || ||| |||| ||||| ||||| || Sbjct 198881 GCTGGGCAGCTATCTCATCCGAGACAGTCGACAGAAAGACATCTTCTTCACACTGTCCTA 198940 Query 91990 TCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTT 92049 ||| | || ||| || ||||||||| | || || |||||| | || | || || || Sbjct 198941 CCACGCCAAGAGCGGGCCGGTCAGTGTGCGCATCGACTACAAGCAGAAAAAGTTCTCATT 199000 Query 92050 GGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACCATTACATC 92104 ||| || | | | | ||| | || || || ||||||||| ||||||||| Sbjct 199001 GGCGGGCAACGAGCGCTCGTTCCAAACGCTCTTTGCCCTGTTGGAGCATTACATC 199055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356192246288575