Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7 120 3e-22 >seq7 Length=16146599 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | |||||| || | || | || |||||||| || ||||| || ||| Sbjct 1869769 CCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 1869710 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| ||||| || || || |||| ||||| ||||| || ||||| Sbjct 1869709 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1869650 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| |||||||| |||||| || | | ||| | ||||| ||||||| ||| Sbjct 1869649 ATGCCCTCTTTGTCCTGGATTTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCGACC 1869590 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||||||||||| ||||| || || || |||||| || Sbjct 1869589 TCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCATACCT 1869539 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||||||||| || || || ||| || |||| ||||| ||||| || ||| Sbjct 1869967 GTGGACTCTTTTTGGATATTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 1869908 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || ||||||| | ||||| || ||||| |||||||| || || ||| || ||| Sbjct 1869907 GCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTAGCTTTG 1869848 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| ||||||| ||||| | || | |||||||| || | || Sbjct 1869847 ACATTCTCAATGGTGTCGCTGGGCTCGACCTCCAGAGTGATGGTCTTGCCTGTGAGGGTC 1869788 Query 139748 TTTACGAATATTTGCATAGCT 139768 || || || || |||||| || Sbjct 1869787 TTCACAAAGATCTGCATACCT 1869767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496004937380000