Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14 120 5e-22 seq6597 84.2 3e-11 >seq14 Length=13523219 Score = 120 bits (132), Expect = 5e-22 Identities = 344/525 (66%), Gaps = 18/525 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||||| | | || || || || ||||| ||| | ||||| | | | || Sbjct 9106042 ACCAACGGCAACTCAAACGGGCTGGTCCCCATGCTGAGAGTCTACAACAACACGGCGCGC 9106101 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 || || ||||||||||| || | || || || | ||| | ||| |||| || ||| Sbjct 9106102 TATGTCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAGCCATGG 9106161 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| ||||| |||||||| | ||| || || ||| | || || ||| | || Sbjct 9106162 CACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGGAAGGAGGAGCAAAGA 9106221 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AAC 97043 ||||| || | || || | | ||| | || || |||||||||||| | ||| | | Sbjct 9106222 GCCAGAGATCTTTTCTACGGCTTGTGGATCCCCGACTTGTTCATGAAGAGAGTCGAGAGC 9106281 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 || | ||||| || ||||| ||| | || ||||| ||| ||| |||||| Sbjct 9106282 AACCAGG---ACTGGTCTCTGATGTGTCCCAGCGAGTGCCCCGGGCTGGACGAGTGCTGG 9106338 Query 97104 GGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 || || ||||||||| ||| ||||| || ||| | ||||| || || | Sbjct 9106339 GGGGAGGAGTTTGAG---AAGCTCTACACCCAGTATGAGAAGGAGGGGCG---GGTCAAG 9106392 Query 97161 CGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 || || | | || | | |||||| | ||| || | | | ||| ||||| || Sbjct 9106393 CGTGTTGTGAAGGCTCAGCAGCTGTGGCACGCCGTCATCGAGTCCCAGACGGAGACGGGT 9106452 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 || |||||||| || ||||| || || || | || |||||||||| | | ||| Sbjct 9106453 ACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTTGGC 9106512 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 |||||||| || ||| || ||||| ||||| || || ||| || Sbjct 9106513 ACCATCAAATGCAGCAACCTCTGCACCGAAATCGTTGAATACACC 9106557 >seq6597 Length=1954 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 ||||||| ||||| || || ||||| |||||||| || ||| || || ||||||| | Sbjct 350 TGGTGGCCTTCGCGGCAGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCTTCCATCTTCT 291 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 |||| |||||| | || ||||||||||| ||||| Sbjct 290 GGCTGAAGAAGAGAGGTCTCATGCCCGGCCTGAC 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740970967639000