Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq13 123 2e-23 >seq13 Length=13670824 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 25780 GTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCT 25839 ||||| ||||| || || | |||||||||||| |||||||| ||||| ||||| || ||| Sbjct 11902520 GTGTATTCTGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCCTCT 11902461 Query 25840 TCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATC 25899 || || | | || || ||||||| || | || || || ||||| ||||||||| Sbjct 11902460 TCTCTTTCCGTGAACCCGAGATTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATC 11902401 Query 25900 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 || ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 11902400 TTCACCCCTTTCTCTGAGAGCTCCTTGGCGTTGGTTGACCC 11902360 Score = 114 bits (126), Expect = 9e-21 Identities = 131/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || || | || ||| |||||||| ||||| || |||||||||||| || || || Sbjct 11903247 AGTCCCGTGATGTGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGG 11903188 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | ||||| || ||| || | |||||| ||||||||||| ||||| | ||| | Sbjct 11903187 ACGCCCAGACCCATATCACCC-GAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGAT 11903129 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 |||||| ||||| || | || || ||| || || ||||| || ||| || |||| Sbjct 11903128 CACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCT 11903074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340098114807825