Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 178 3e-39 >seq14 Length=13523219 Score = 178 bits (196), Expect = 3e-39 Identities = 567/868 (65%), Gaps = 16/868 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || |||||||| ||| | ||| | || ||| |||||||||| | | | | || Sbjct 9105742 GAGCGGCCGCAGCACATGCTCATGAGAGTGGCTGTTGGTATCCACAAAACAGCTATCGAC 9105801 Query 363508 GCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 ||||| || || || || || || ||| || | ||| ||||| ||||| | || | Sbjct 9105802 GCCGCCATCGAGACCTACAACCTGCTCTCAGAGAA-GTGG-TTCACCCACGCGTCTCCTA 9105859 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||| || ||||| | || ||| |||| ||||| || || | |||| Sbjct 9105860 CGCTCTTCAACGCAGGAACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCACCATGA 9105919 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || |||||| || || | |||||| || ||| | ||||| || || |||||| Sbjct 9105920 AGGATGACAGCATCGACGGCATTTATGACACGCTGAAGCAGTGTGCCCTCATCTCCAAGT 9105979 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCG 363745 || || ||||| || || || || | | | || | || |||||| | Sbjct 9105980 CAGCTGGAGGAATCGGCGTGGCGGTCAGCTGCATCAGATCAACGGGGAGCTACATTGCTG 9106039 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 |||| || |||| || |||||||| |||||||| | || | |||| || ||| Sbjct 9106040 GCACCAACGGCAACTCAAACGGGCTGGTCCCCATGCTGAGAGTCTACAACAACACGGCGC 9106099 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | || ||||||||||| || ||| | ||||| || || ||||| || ||||| Sbjct 9106100 GCTATGTCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAGCCAT 9106159 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || || | ||||| || || ||||| ||| ||||| || || ||||| Sbjct 9106160 GGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGGAAGGAGGAGCAAA 9106219 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG- 363984 | || | ||||| ||||| | | ||| | | ||| || |||||| | || ||| Sbjct 9106220 GAGCCAGAGATCTTTTCTACGGCTTGTGGATCCCCGACTTGTTCATGAAGAGAGTCGAGA 9106279 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | || | |||| || | || || ||| || || || || ||| ||| Sbjct 9106280 GCAACCAGGACT-GGTCTCTGATGTGTCCCAGCGAGTGCCCCGGGCTGGACGAGTGCTGG 9106338 Query 364045 GGTGACGACTATGTT--GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | || |||||| || | |||||| |||||| || || ||| Sbjct 9106339 GGGGAGGAGTTTGAGAAGCTCTACACCCA--GTATGAGAAGGAGGGGCGGG-TC--AAGC 9106393 Query 364103 CAATTCCC---GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 || || ||| |||| ||| ||| |||| || || |||| ||||| || | Sbjct 9106394 GTGTTGTGAAGGCTCAGCAGCTGTGGCACGCCGTCATCGAGTCCCAGACGGAGACGGGTA 9106453 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 |||| || ||| |||||||||| | |||||| | ||| |||||| ||| | ||||| | Sbjct 9106454 CACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTTGGCA 9106513 Query 364220 CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 | || | |||||||| || ||||| || ||||||||||| | ||| ||| | Sbjct 9106514 CCATCAAATGCAGCAACCTCTGCACCGAAATCGTTGAATACACCAGTGACGATGAGGTCG 9106573 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCT 364307 |||| ||||| || || || ||||| || Sbjct 9106574 CCGTCTGTAATCTGGCCTCCATCGCTCT 9106601 Score = 87.8 bits (96), Expect = 5e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 364967 TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCA 365026 ||||||| |||||||||| |||| |||||||| |||||||| ||| | || | Sbjct 9107457 TTCCAGATGATCTGAAGCAGCTTTATAAAACCGTGTGGGAAATCTCCCAGAAGACCATAC 9107516 Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 | | ||||| || || || || || | ||| ||||||||||| | ||| | || Sbjct 9107517 TGAAGATGGCTGCTGACCGAGGCGCCTACATCGACCAGAGCCAGTCCATGAACATCCACA 9107576 Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 | || |||||| || || ||| || || |||||| |||||||| |||||| Sbjct 9107577 TCGCTGAGCCAAACTACGGCAAACTGACCAGCATGCACTTCTACGGCTGGAAA 9107629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303194539948550