Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq109 116 2e-21 seq1570 84.2 1e-11 seq586 82.4 5e-11 >seq109 Length=446104 Score = 116 bits (128), Expect = 2e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||||||| || | ||| || || ||||| ||||||||||| ||||||||| |||||||| Sbjct 328259 ACCCGACCAAGTTTTTTGGTTGTGAACTCGGCGCTCAGACCCAGTTTGATTCCAAAAACG 328200 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | |||||| |||||||| || | | |||| |||||||| | ||||| || | Sbjct 328199 ACCGTTACATCGTCAACGGATCCCACGAGGCGAACAAGTTGCAGGACATGCTTGATGGGT 328140 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || | || ||||||||||| || || || ||||| || || || || Sbjct 328139 TCATCAGAAAATTTGTGCTGTGCACCGAGTGTGACAACCCTGAAACTGATCT 328088 >seq1570 Length=17234 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGT 20009 ||||||||||||||||||||||||||||| ||||||||| |||||||||||| | Sbjct 5385 TCTCTTCAAAGTTCTTTTCAACTTTCCCTTGAGGTACTTGTCGACTATCGGTCTCGTGCC 5444 Query 20010 AATATTTAGCCTTA 20023 |||||||||||| Sbjct 5445 GGTATTTAGCCTTA 5458 >seq586 Length=40267 Score = 82.4 bits (90), Expect = 5e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||||||| | ||||||||| |||| | ||||| | Sbjct 36746 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTAAAGGTACTTGTCAACTATAGTTCTCGTGC 36687 Query 20009 TAATATTTAGCCTTA 20023 | ||||||| |||| Sbjct 36686 TGGTATTTAGTCTTA 36672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334908317340275