Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7 134 1e-26 >seq7 Length=16146599 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||| || | ||| | || || ||||| || |||||||| ||| Sbjct 1869772 ATACCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG 1869713 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||| || || || || ||| ||||||||||||| ||||| ||| Sbjct 1869712 GAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGA 1869653 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || ||||| |||||||| || ||| | ||| | | ||||| |||||| ||| || Sbjct 1869652 GGGATGCCCTCTTTGTCCTGGAT-TTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTC 1869594 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| |||| ||| | || ||||||||||| ||||| ||||| |||||||| Sbjct 1869593 GACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| || || || ||||| || || || ||| Sbjct 1869511 GTGGACTCCTTCTGGATGTTGTAATCTGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCA 1869452 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| ||||| ||||| |||||||| || || ||||| ||| Sbjct 1869451 GCAAAAATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTAGCTTTG 1869392 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| ||||| |||| || | || || || ||||| || Sbjct 1869391 ACATTCTCAATGGTGTCACTGGGCTCGACCTCCAAAGTGATGGTCTTACCAGTCAGGGTC 1869332 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 1869331 TTCACAAAGATCTGCAT 1869315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420085628304300