Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7 102 6e-17 >seq7 Length=16146599 Score = 102 bits (112), Expect = 6e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||||||| |||| |||||||| || ||| ||| ||||| |||||||| || | Sbjct 1869770 ACCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 1869711 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || || |||| |||| ||||||||||| || || || |||||||| || | Sbjct 1869710 GAGAGTGCGGC-CGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAG 1869652 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATT 34075 | | || |||||||||| ||||| ||||| | | || | ||| | | | Sbjct 1869651 GGATGCCCTCTTTGTCCTGGATTTTGGCCTTAA---CATTTTCAATGGTGTCACTGGGCT 1869595 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || | || || || || ||||| || |||||||||||||| ||||| Sbjct 1869594 CGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Score = 98.7 bits (108), Expect = 8e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||||||| || ||||| ||||| || ||| ||||||||| ||||||||||||| Sbjct 1869542 ACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGA 1869483 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || |||| |||| |||||||| ||||| ||||| | |||||| || Sbjct 1869482 CAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTC 1869429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397016306639050