Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq14 196 6e-45 seq6597 96.9 4e-15 seq45 82.4 9e-11 >seq14 Length=13523219 Score = 196 bits (216), Expect = 6e-45 Identities = 837/1305 (64%), Gaps = 42/1305 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| |||||||||||| Sbjct 9107123 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 9107064 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || |||||||| | | || | | || |||| Sbjct 9107063 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCC 9107004 Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 || || | |||||| || | || || | |||||| |||| || || Sbjct 9107003 TTCAGCAGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 9106950 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 |||||||| || | | | | || | || || |||||||||| |||||| | | Sbjct 9106949 TGGAGGATGCCCTTGCTGACAGGACAGCCTTCGTATGTCTCGTAGGGGCCCAACTCGGCT 9106890 Query 114176 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 |||| ||| |||||||||| ||||| |||| || || |||||||| || | ||| Sbjct 9106889 GCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTC 9106830 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | || ||||| | ||||| | | || || || || | || || | | Sbjct 9106829 AGCAGCTGAGCCTCTGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAAA 9106770 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352 || ||||| |||| |||||||| | || | | | || ||||| ||| ||| | Sbjct 9106769 CCCTGGACGCCGATTCCAATTGGCCTGTGGCGCTTGTTGGACTTATCAGC---CTCGGGC 9106713 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || || | || | || || | | | || || || ||| || ||| || || | Sbjct 9106712 ACTGGGTAGTAGTTAATCTCTATGATCTTGTTCAGGTTCTTGACGATAACTTTGGTCACA 9106653 Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 114472 | || |||| | | |||||| | || ||| |||| ||| | || ||| Sbjct 9106652 GACTCCAGTTTTTTGAAGTCAAAAGTCCG---CTCGGGGGTGACGTACATGTTGAGAGCG 9106596 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || ||||||||||| || | | |||||| | | ||||| || | ||||| || Sbjct 9106595 ATGGAGGCCAGATTACAGACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTG 9106536 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || | || | || |||||||| | |||| ||| || ||| |||| || || Sbjct 9106535 CAGAGGTTGCTGCATTTGATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCG 9106476 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 || ||||| |||||||| || || ||||||||||| ||||||| || | || | ||| Sbjct 9106475 TCTTTGTACAGCATGTACGGTGTACCCGTCTCCGTCTGGGACTCGATGACGGCGTGCCAC 9106416 Query 114653 A-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711 | | | | | || |||| ||| | |||||||||| ||| |||| |||||||| Sbjct 9106415 AGCTGCTGAGCCT-TCACAACACGCTTGACCCGCCCCTCCTTCTCATACTGGGTGTAGAG 9106357 Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 114770 |||||||| || ||| | ||| ||||| || || | ||||| || | | Sbjct 9106356 CTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCACTCGCTGGGACACATCA 9106298 Query 114771 GAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||||||| | || | ||| || | ||||||||| | ||| |||||||| | ||| Sbjct 9106297 GAGACCA--GTCCTGGTTGCTCTCGACTCTCTTCATGAACAAGTCGGGGATCCACA-AGC 9106241 Query 114829 TG-AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 | |||| ||||| | | | ||| || | |||| || || || ||||| Sbjct 9106240 CGTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTGTG-TTCTTCTTCAGCTCCAGG 9106182 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACG 114942 ||||| | | || |||||| || |||||||||| |||| | ||| || | Sbjct 9106181 AAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTG 9106122 Query 114943 ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGAT 115002 | || |||||| ||||| | ||| ||| || | || | ||||| || | | Sbjct 9106121 TTG-CCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAG 9106063 Query 115003 ACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCATGG 115060 || | || | ||| || || || ||| | | | ||||| || | | Sbjct 9106062 CCCGTTTGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCGTTGATCTGATGCAGC--TG 9106005 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 | || || || || || || |||| ||||| | || |||| | | || || | Sbjct 9106004 ACCGCCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCA 9105945 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 || || |||||||| |||| |||| | | || ||||||||||| |||| || ||| Sbjct 9105944 TAAATGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGC 9105885 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || || || ||||||||||| || || | ||||||| ||||| Sbjct 9105884 CTGTTGGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTGAAC 9105840 >seq6597 Length=1954 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||| || || |||||| ||| || ||||||||||| | ||||| Sbjct 225 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTCTCTTCT 284 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || | | || ||||| |||||||||||||||||||| |||||| | Sbjct 285 TCAGCCAGAAGATGGAAGCGAACGAACCAGAGAAGAAGATTCCCTCCACTGCCGCGAAGG 344 Query 126186 C 126186 | Sbjct 345 C 345 >seq45 Length=2253462 Score = 82.4 bits (90), Expect = 9e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | ||| || ||||| |||||| || || ||||| | || | ||||| Sbjct 2024577 CCTCATCCCTGCTGATCAGCTCATTGGAGAAGGTAAGCCCAGGCATTAATCCTCTCTTCT 2024636 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 ||| ||| || || ||| |||||||| ||||||||||||||||||||| Sbjct 2024637 TCAGCCAAAAGATGGCAGCGAATGAACCGGAGAAGAAGATTCCCTCCACA 2024686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597282477587000