Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14 205 9e-48 >seq14 Length=13523219 Score = 205 bits (226), Expect = 9e-48 Identities = 909/1419 (64%), Gaps = 33/1419 (2%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || |||||||| || ||| ||| ||| |||| || |||||| | || Sbjct 9105856 CCTACGCTCTTCAACGCAGGAACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCACC 9105915 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||| |||| ||| |||| |||| || ||| | ||||| |||||| Sbjct 9105916 ATGAAGGATGACAGCATCGACGGCATTTATGACACGCTGAAGCAGTGTGCCCTCATCTCC 9105975 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | || || |||||||| | ||| | | | | | | ||| |||||| Sbjct 9105976 AAGTCAGCTGGAGGAATCGGCGTGGCGGTCAGCTGCATCAGATCAACGGGGAGCTACATT 9106035 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 || ||||| |||| ||| ||||| || ||||| ||||| | |||| ||||||| || Sbjct 9106036 GCTGGCACCAACGGCAACTCAAACGGGCTGGTCCCCATGCTGAGAGTCTACAACAACACG 9106095 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 |||||||| || |||||||| || | ||| || | ||||| | || || ||| Sbjct 9106096 GCGCGCTATGTCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAG 9106155 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| |||||| | ||| | || ||| |||||| || || || | Sbjct 9106156 CCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGGAAGGAGGAG 9106215 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | || |||||||| || ||||||| | ||| | || ||| | || ||||| | ||| Sbjct 9106216 CAAAGAGCCAGAGATCTTTTCTACGGCTTGTGGATCCCCGACTTGTTCATGAAGAGAGTC 9106275 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 |||| ||| | |||| ||| | ||||||| || || ||||| ||| ||| Sbjct 9106276 GAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAGCGAGTGCCCCGGGCTGGACGAGTGC 9106335 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 || || | ||||| | | || | | || || | |||| || || | Sbjct 9106336 TGGGGGGAGGAGTTTGAGAAGCTCTACACCCAGTATGAGAAGGAGGGGCGGGTCAAGCGT 9106395 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 ||| || | ||| | |||||||| | || | || ||| |||||||||||| Sbjct 9106396 GTTGTGAAGGCTCAGCAGCTGTGGCACGCCGTCATCGAGTCCCAGACGGAGACGGGTACA 9106455 Query 94498 CCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 || ||||| ||| ||| ||| | |||| ||| |||||| ||| | || || Sbjct 9106456 CCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTTGGCACC 9106515 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||||| || || || |||||||| || || || || || | || ||| | || Sbjct 9106516 ATCAAATGCAGCAACCTCTGCACCGAAATCGTTGAATACACCAGTGACGATGAGGTCGCC 9106575 Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACT 94677 || ||||| |||| ||||||| || || || | || || | || || ||| Sbjct 9106576 GTCTGTAATCTGGCCTCCATCG--CTCTCAACAT--GTACGTCACCCCCGAGCGG--ACT 9106629 Query 94678 GCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG-ATGGTCTTGAACCTGAA 94736 | ||| | |||| ||||| | ||| || ||| ||||||||| Sbjct 9106630 TTTGACTTCAAAAAACTGGAGTCTGTGACCA-------AAGTTATCGTCAAGAACCTGAA 9106682 Query 94737 CAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCA 94796 || | | || || | |||| |||||| || || ||||| || || || ||| | || Sbjct 9106683 CAAGATCATAGAGATTAACTACTACCCAGTGCCCGAGGCTGATAAGTCCAACAAGCGCCA 9106742 Query 94797 TCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCC 94856 |||| || || ||||||||||||||||| || ||||| | | |||||||| || Sbjct 9106743 CAGGCCAATTGGAATCGGCGTCCAGGGTTTGGCCGACGCCTTCATCCTGATGCGTTACCC 9106802 Query 94857 CTACGA---CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913 || || | | | | | | || | | ||| | | || || || | ||| || || Sbjct 9106803 CTTTGAAAGCCCAGAGG-CTCAGCTGCT--GAACATCCAGATCTTTGAGACCATCTACTA 9106859 Query 94914 CGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAATCG 94971 || ||| || | | | | | | | |||| | | || | ||||| | |||| | Sbjct 9106860 CGCCGCCCTGGAGGCGAGCTG-CGAGCTGGC---AGCCGA-GTTGGGCCCCTACGAGACA 9106914 Query 94972 TTCCGCGGATCGCCCTTGGAACA-GGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 | | || | | ||| | || |||||| | |||| |||| | |||| || ||| Sbjct 9106915 TACGAAGGCT-GTCCTGTCAGCAAGGGCATCCTCCAGTACGACATGTGGGAGAAGACGCC 9106973 Query 95031 CTCGGGTCTGTACGACTGGGAAGCT-CTACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089 | | | |||| |||||| ||||| || | | | ||| ||||| |||| | Sbjct 9106974 CACCGACCTGTGGGACTGG-AAGCTGCTGAAGGAAAAGATCGCCAAGCACGGCGTGAGGA 9107032 Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149 || ||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| Sbjct 9107033 ACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACG 9107092 Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||| |||| ||| |||| |||| | |||| | | |||| || |||| || || | Sbjct 9107093 AGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGGAGAGTTTC 9107152 Query 95210 CCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| || || || ||||||||| || ||||| | || || Sbjct 9107153 AGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGACTGTGGAGCGAGGAGA 9107212 Query 95270 TCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAG 95307 | || ||||| ||| | ||| | |||||| ||| | ||| Sbjct 9107213 TGAAAAACCAGCTGAT-CGCTCACAACGGATCCATTCAG 9107250 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 ||||||||||| || ||||| | | | | || |||||| | || ||| |||||||| Sbjct 9105286 GTCATGTTCGATAAAATCACCTCTCGTATCCAGAAGCTTTGCTATGGGCTGAACTCTGAC 9105345 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 ||||||||||| || |||| |||| |||| ||||| | || || ||||| Sbjct 9105346 TTCGTGGATCCAACTCAGATCACAATGAAGGTGATCCAGGGTCTGTACAGTGGTGTCACC 9105405 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 || || |||||||| |||||| || |||| |||| | | | || || ||||| Sbjct 9105406 ACAGTGGAGCTCGACACTCTGGCTGCAGAGATCGCTGCCACCCTCACGACCAAACACCCA 9105465 Query 93511 GACTACTCCATTTTGGCTGCTCGAATC 93537 ||||| |||| | ||||| || ||| Sbjct 9105466 GACTATGCCATCCTCGCTGCACGGATC 9105492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494664297019000