Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 232 7e-56 seq7 116 4e-21 >seq14 Length=13523219 Score = 232 bits (256), Expect = 7e-56 Identities = 914/1421 (64%), Gaps = 44/1421 (3%) Strand=Plus/Minus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||||| ||| | | || | ||| ||||| ||||| || || || || |||| || || Sbjct 9107117 TTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTG 9107058 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194 ||||| |||| || || |||| || ||||||| || | ||||||| | Sbjct 9107057 GGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGC 9106998 Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254 || ||| |||||||| | | || ||| | ||||||||||||||| | | || Sbjct 9106997 AGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 9106938 Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGC 153312 ||| | |||| ||| | | || |||| ||| | | || ||||| |||| Sbjct 9106937 TTGCTGACAGGACAGCCTTCGTATGTCTCGTAGGGGCC--CAACTCGGCTGCCAGCTCGC 9106880 Query 153313 AGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCG 153372 |||| ||||| || ||| | ||||| ||||| || ||| || | || || | | Sbjct 9106879 AGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAG 9106820 Query 153373 CTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 | ||| ||| || | || |||| ||| | ||||||||||||| |||||||| | Sbjct 9106819 CCTCTGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGC 9106760 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGC-----TGCGCCTCGCGCTCGCTATGGGATA 153487 ||| || || || | || || |||| | |||||| || | |||| || Sbjct 9106759 CGATTCCAATTGGCCTGTGGCGCTTGTTGGACTTATCAGCCTCGGGCAC----TGGG-TA 9106705 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAG 153547 || || || || || ||||| ||||| || | ||||| || | | || || Sbjct 9106704 GTAGTTAATCTCTATGATCTTGTTCAGGTTCTTGACGATAACTTTGGTCACAGACTCCAG 9106645 Query 153548 TTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACG 153606 ||| | ||| ||| | ||| ||| | | ||||| || || | || || || | Sbjct 9106644 TTTTTTGAAGTCAAAAGTCCGCTCGGGGGTGACGTAC--ATG--TTGAGAGCGATGGAGG 9106589 Query 153607 CCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGT 153666 |||||||||||||||| ||| ||| | | |||| | ||||| |||| |||||||| Sbjct 9106588 CCAGATTACAGACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTGCAGAGGT 9106529 Query 153667 TGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGA 153726 |||||||||| ||| ||| | ||| || || ||||| || | ||||| ||||||||| Sbjct 9106528 TGCTGCATTTGATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGT 9106469 Query 153727 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTCCT 153786 | |||||||||||| || ||||| || | |||| || ||| | || Sbjct 9106468 ACAGCATGTACGGTGTACCCGTCTCCGTCTGGGACTCGATGACGGCGTGCCACAGCTGCT 9106409 Query 153787 GCGC--TCGC-ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCT 153843 | || || | || |||| || || ||||| |||| || | ||| || || Sbjct 9106408 GAGCCTTCACAACACGCT--TGA-CCCGCCCCTCCTTCTCATACTGGGTGTAGAGCTTCT 9106352 Query 153844 CAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGAC 153902 ||||||| || || |||| ||| | || ||||| |||| | || ||||||||||| ||| Sbjct 9106351 CAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTG-GGACACATCAGAGAC 9106293 Query 153903 CACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATG 153962 || | || | | ||| | |||||||| || || | ||| | |||| | Sbjct 9106292 CAGTCCTGGTTGCTCTCGACTCTCTTCATGAACAAGTCGGGGATCCACAAGCCGTAGAAA 9106233 Query 153963 AGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTAT 154020 || || | || | |||| |||||| || |||| ||||| | || | | | Sbjct 9106232 AGATCTCTGGCTCTTTGC--TCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAA 9106175 Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGC 154077 | | ||| |||||| || || | ||| | ||| | ||| || | | || |||| Sbjct 9106174 ACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGC 9106115 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 |||| ||||| | |||| || | |||||| |||| | || |||||| |||| ||| ||| Sbjct 9106114 CCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGCCCGTTTG 9106055 Query 154138 CGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTA---- 154193 | |||||||||| | || | ||| || || | ||||||| | | Sbjct 9106054 AGTTGCCGTTGGTGCCAGCAATGTAGCTCCC-----CGTTGATCTGATGCAGCTGACCGC 9106000 Query 154194 -ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGAT 154252 ||||| || || || | |||| || ||| || || | |||||| || || Sbjct 9105999 CACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATAAAT 9105940 Query 154253 GCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCG 154312 |||||||||||| || || | | ||||| ||| || ||| || || || Sbjct 9105939 GCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 9105880 Query 154313 CGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCG 154372 ||||| || ||||| || ||| |||||| || ||| || | | || | Sbjct 9105879 GGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTGAACCACTTCTCTGAGAGCAGGTT 9105820 Query 154373 GTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAG 154432 ||| || ||||||||| | |||||| | ||| || || | || || | |||||| Sbjct 9105819 GTAGGTCTCGATGGCGGCGTCGATAGCTGTTTTGTGGATACCAACAGCCACTCTCATGAG 9105760 Query 154433 CATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCA 154473 |||||||||||| || ||||| ||| | || ||||||| Sbjct 9105759 CATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCA 9105719 >seq7 Length=16146599 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || |||||| || | ||| | | | ||||| || || |||||||||||| Sbjct 1869769 CCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 1869710 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || || || || |||| |||| |||||||| ||||| ||||| Sbjct 1869709 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1869650 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| || | | ||| | |||||| | | ||| ||| Sbjct 1869649 ATGCCCTCTTTGTCCTGGATTTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCGACC 1869590 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || ||||| ||||| ||||| |||||||| Sbjct 1869589 TCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496203313758000