Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq15 134 5e-26 seq21 91.5 6e-13 seq11 91.5 6e-13 >seq15 Length=13389401 Score = 134 bits (148), Expect = 5e-26 Identities = 452/696 (65%), Gaps = 15/696 (2%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||| | |||||||||| ||| ||||| || |||| |||| |||| || || Sbjct 1599547 ATTGGCATTGATTTGGGAACCACCTATTCTTGTGTTGGGGTTTTCCAACATGGCAAAGTG 1599488 Query 450977 GAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGT----TTTA 451031 || || || || || ||||| || | || || | ||||| || | || || |||| Sbjct 1599487 GAGATCATTGCCAACGACCAGGGCAACAGGA-CAACTCC--CA--GCTATGTGGCCTTTA 1599433 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAA 451090 | || |||| || || | || | ||||| || | | | | | | || ||| Sbjct 1599432 CRGACACAGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTTGCCATGAACC-CCACC 1599374 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||| ||| ||| || || || |||| || | | || | |||| | || || Sbjct 1599373 AATACAATATTTGARGCCAAGCGACTAATAGGAAGAAAGTTTAATGACTCCATCGTCCAG 1599314 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 || | ||| | | ||| | || | | | | || ||||||||| | |||| Sbjct 1599313 TCCGACATGAAACTTTGGCCTTTCAAGGTGATCAGTGATAACGGAAAGCCCAAAGTTCAG 1599254 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | |||||||| ||||| || | || ||||||||||| || || ||||| || Sbjct 1599253 GTGGAGTATAAAGGCGAAACCAAGGCCTTCTACCCTGAAGAAATCTCGTCAATGGTCCTG 1599194 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 ||||||||| || | ||| || || | || ||| | ||||||| || Sbjct 1599193 GTTAAAATGAAGGAGATAGCTGAGGCCTACCTGGGACAAAAGGTTTCAAATGCAGTCATC 1599134 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || ||||||||||||||| | || ||||||| ||||| ||||| ||| || Sbjct 1599133 ACAGTGCCAGCTTATTTCAATGATTCTCAGAGGCAAGCCACTAAGGATGCTGGAGTGATC 1599074 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| | ||| |||| | || || || ||||| |||||||| || | || || || Sbjct 1599073 TCTGGTCTGAATATTCTGAGGATCATCAACGAACCCACAGCAGCAGCGATTGCCTACGGC 1599014 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 ||| ||| | ||| || ||| || | | | |||||| | |||||||| Sbjct 1599013 TTAGATAAAGGTA---AAAGAGGAGAGCGCAARGTGCTCATCTTTGATCTCGGTGGAGGC 1598957 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || ||| || | || | ||||| || || | ||||| ||||| || || Sbjct 1598956 ACCTTTGACGTGTCCATCCTGACCATTGAGGACGGCATCTTTGAGGTAAAAGCCACTGCA 1598897 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 || || || || || || || || || |||| ||| Sbjct 1598896 GGAGACACACACCTTGGTGGGGAGGACTTTGACAAT 1598861 >seq21 Length=10546925 Score = 91.5 bits (100), Expect = 6e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 ||||||| || || ||||| ||||| |||||||| | || || ||||| |||||||||| Sbjct 2489958 ATGCAGTCATCACGGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACTAAAGATG 2489899 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| |||||||| | ||||| || || || || ||||| || || || || || Sbjct 2489898 CTGGAGTCATTGCTGGGCTCAATGTGCTGCGCATCATCAATGAGCCCACTGCTGCAGCCA 2489839 Query 451440 TAGCATATGGACT 451452 | || ||||| || Sbjct 2489838 TTGCTTATGGCCT 2489826 >seq11 Length=13916851 Score = 91.5 bits (100), Expect = 6e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || ||||| || || || || || ||||| | ||||| |||||||| || |||| Sbjct 13377018 ATGCTGTTATTACAGTACCTGCATACTTTAATGACTCGCAACGTCAAGCAACCAAGGATG 13377077 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| ||| ||||||||||||| | |||| || ||||| ||||| ||||| || Sbjct 13377078 CTGGAACTATCTCTGGTTTAAATGTGTTAAGAATCATAAATGAGCCTACTGCAGCAGCCA 13377137 Query 451440 TAGCATATGG 451449 | || ||||| Sbjct 13377138 TCGCTTATGG 13377147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975477285178700