Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 192 7e-44 seq6597 87.8 2e-12 seq45 84.2 3e-11 >seq14 Length=13523219 Score = 192 bits (212), Expect = 7e-44 Identities = 898/1399 (64%), Gaps = 44/1399 (3%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| |||||| | || || ||||||||||| || || || || || ||||||| Sbjct 9105840 GTTCACCCACGCGTCTCCTACGCTCTTCAACGCAGGAACCAACAGGCCTCAGCTGTCCAG 9105899 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| | | | ||||| || ||| | |||||||| | ||| || | | Sbjct 9105900 CTGCTTCCTGCTCACCATGAAGGATGACAGCATCGACGGCATTTATGACACGCTGAAGCA 9105959 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881 ||||||| ||||| |||| ||||| || ||||| || || | || ||||| Sbjct 9105960 GTGTGCCCTCATCTCCAAGTCAGCTGGAGGAATCGGCGTGGCGGTCA--GCTGCATCAGA 9106017 Query 111882 GCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 | ||| | | ||| || || || || | ||| | || | | || ||||| Sbjct 9106018 TC-AACGGGGAGCTACATTGCTGGCACCAACGGCAACTCAAACGGGCTGGTCCCCATGCT 9106076 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAGGGATCTA 111999 | || | ||| ||| ||||||||||| |||| ||||| | |||| || | Sbjct 9106077 GAGAGTCTACAACAACACGGCGCGCTATGTCGACCA----GGGCGGCAACAAGAGACCCG 9106132 Query 112000 ------TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGC 112053 |||| | || || |||||||||||| || | | || ||||| ||| || Sbjct 9106133 GGGCCTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGA 9106192 Query 112054 GTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATT 112112 ||| ||| | |||||| | | ||| | ||||| |||| || | ||||| Sbjct 9106193 AGAAGAACACAGGGAAGGAGGAG-CAAAGAGCCAGAGATCTTTTCTACGGCTTGTGGATC 9106251 Query 112113 CCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC 112172 || || | |||||||||||||| ||| | | |||||||| | ||||| | Sbjct 9106252 CCCGACTTGTTCATGAAGAGAGTCGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAGC 9106311 Query 112173 AAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTA 112231 || ||||| || ||| ||| | ||| ||||||||||| |||||||| |||| Sbjct 9106312 GAGTGCCCCGGGCTGGACGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCCAGTA 9106370 Query 112232 CGAGGAAGAAAGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTGTGGAAAGCTATTC 112290 ||| | || | |||| | ||| ||| ||| | ||||| | || | Sbjct 9106371 TGAGAAGGAGGGGCGGGTCAA-GCGTGTTGTGAAGGCTCAGCAGCTGTGGCACGCCGTCA 9106429 Query 112291 TCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAA 112350 || |||| || || ||||| |||||||| || ||||| |||||||||||||| ||| | Sbjct 9106430 TCGAGTCCCAGACGGAGACGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACAGGA 9106489 Query 112351 AGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGG 112410 |||| || ||| ||||| | || ||||| | ||||||||| || |||||| | | Sbjct 9106490 AGAGCAACCAACAGAATCTTGGCACCATCAAATGCAGCAACCTCTGCACCGAAATCGTTG 9106549 Query 112411 AATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT 112470 ||| || | |||||| || || ||||| || || || ||||||||| || || Sbjct 9106550 AATACACCAGTGACGATGAGGTCGCCGTCTGTAATCTGGCCTCCATCGCTCTCAACATGT 9106609 Query 112471 ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTG 112530 | || || ||| ||| ||||| | ||||||| | || || ||| | Sbjct 9106610 ACGTCACCCCCGAG---CGGACTTTTGACTTCAAAAAACTGGAGTCTGTGACCAAAGTTA 9106666 Query 112531 TCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTC 112587 || || ||||| |||| | || || | || | ||||| || ||| ||| Sbjct 9106667 TCGTCAAGAACCTGAACAAGATCATAGAGATTAACTACTACCCAGTGCCCGAG---GCTG 9106723 Query 112588 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTAT 112647 ||| || || | | | ||| | |||||||| |||| ||||| ||| | || || | | Sbjct 9106724 ATAAGTCCAACAAGCGCCACAGGCCAATTGGAATCGGCGTCCAGGGTTTGGCCGACGCCT 9106783 Query 112648 TCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATAT 112707 |||| || || || | ||||| | || || || | || | || | Sbjct 9106784 TCATCCTGATGCGTTACCCCTTTGAAAGCCCAGAGGCTCAGCTGCTGAACATCCAGATCT 9106843 Query 112708 TTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAG--AGGTTGATGG 112765 ||||||| || || ||||||| || |||||||| | ||| |||||| |||| || Sbjct 9106844 TTGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCAGCCGAGTTG--GG 9106901 Query 112766 TCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATG 112823 || || || || | || || | ||| | ||| |||||| | || || | || ||| Sbjct 9106902 CCCCTACGAGACATACGAAGGCTGTCCTG--TCAGCAAGGGCATCCTCCAGTACGACATG 9106959 Query 112824 TGGGAAGGTGA-GACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGG 112881 |||| || || | ||| | | |||| ||| ||| || |||||| ||| Sbjct 9106960 TGGG-AGAAGACGCCCACCGACCTGTGGGACT-GGAAGCTGCTGAAGGAAAAGATCGCCA 9107017 Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941 || | || | | ||||| || || |||| || ||||| || ||||||||||| || | Sbjct 9107018 AGCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGA 9107077 Query 112942 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCC 113001 || |||| || || || | | | || ||||||| | |||||||| | || || Sbjct 9107078 TCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGGGTCC 9107137 Query 113002 TCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTC 113061 | | ||||||||| ||| |||||| ||||| | | ||||| | |||| || | Sbjct 9107138 TGTCCGGAGAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGAC 9107197 Query 113062 TCTGGTCCAAGGATATGAA 113080 | ||| | |||| ||||| Sbjct 9107198 TGTGGAGCGAGGAGATGAA 9107216 >seq6597 Length=1954 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||| ||| | || | ||||| |||||| ||||| Sbjct 333 GTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCTTCCATCTTCTGGCTGAAGAAGAGAGGT 274 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 |||||||| || || ||||||||||||||| ||| Sbjct 273 CTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 238 >seq45 Length=2253462 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 102179 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 102238 ||||||| | | || ||||| ||| ||||| ||||||||||| ||||| ||| || Sbjct 2024710 TGAGCGAATTGTGGCTTTTGCTGCTGTGGAGGGAATCTTCTTCTCCGGTTCATTCGCTGC 2024651 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||| |||||| |||| | ||||| || || ||||||||| ||||| || Sbjct 2024650 CATCTTTTGGCTGAAGAAGAGAGGATTAATGCCTGGGCTTACCTTCTCCAATGAGCTGAT 2024591 Query 102299 C 102299 | Sbjct 2024590 C 2024590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620668492858000