Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1660 208 1e-47 seq11 183 5e-40 seq3 161 2e-33 seq14 125 1e-22 seq3119 93.3 7e-13 seq6597 91.5 2e-12 seq25 89.7 8e-12 >seq1660 Length=16444 Score = 208 bits (230), Expect = 1e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 5562 TGTACTTGGTCACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 5503 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| ||||||||||||||||| | || | ||| ||| ||||||||| | Sbjct 5502 GCAGCAGGCGGACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 5443 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||||| |||| |||||| | || || ||||||| Sbjct 5442 GGGCCAGGCGGGAGGCCTCACCGGCGATGCGCTCGAAGATGTCGCTSACGAAGGAGTTCA 5383 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||||||||| |||||||||| Sbjct 5382 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 5323 Query 1485710 AAAC 1485713 | || Sbjct 5322 ACAC 5319 >seq11 Length=13916851 Score = 183 bits (202), Expect = 5e-40 Identities = 187/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || |||||||| | ||||| |||||| ||| Sbjct 13382451 TGTACTTGGTCACAGCCTTGGTGCCCTCGGACACGGCGTGTTTCGCCAGCTCGCCGGGCA 13382392 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || |||||||||||||| | || | ||| ||| ||||||||| | Sbjct 13382391 GCAGCAGGCGGACAGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 13382332 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| || || || || | ||||| |||| ||||||||||| || ||||||| Sbjct 13382331 GCGCCAGCCGCGACGCTTCACTGGCTATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 13382272 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| ||| ||| |||||||||||||| | |||||||| Sbjct 13382271 TGATGCCCATGGCCTTGGAGGAGATCCCCGTGTCTGGGTGCACCTGCTTCAACACCTTGT 13382212 Query 1485710 AAAC 1485713 | || Sbjct 13382211 ACAC 13382208 >seq3 Length=22537114 Score = 161 bits (178), Expect = 2e-33 Identities = 173/226 (77%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 16442811 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCCGGCA 16442870 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || ||||||||||| | ||| | | || ||| ||| ||||||||| || | Sbjct 16442871 GCAGCAGCCGGACGGCGGTCTGCACCTCCCTGCTGGTGATGGTGGAGCGCTTGTT-GTAC 16442929 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | ||||| ||| ||||||||| |||| || |||| || ||||||||| || |||||| Sbjct 16442930 TGGGCCAGCCGGGACGCCTCGGTGGCGATCCGCTCGAACAGGTCGTTGACGAAAGAGTTC 16442989 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCT 1485694 ||||| ||| | | ||||||| ||| ||| ||||| |||| Sbjct 16442990 ATGATGCTCATGGCCCGGCTGGAGATCCCCGTGTCCGGGTGAACCT 16443035 >seq14 Length=13523219 Score = 125 bits (138), Expect = 1e-22 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||||||||||||||||| ||| |||| | |||||||| || || ||||| Sbjct 9106116 GCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGCCCGTT 9106057 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGC----GCACCTTGTGCGCGG 2073652 || | |||||||||||| || | |||| |||| | | ||| || | | Sbjct 9106056 TGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCGTTGATCTGATGCAGCT----GACCG 9106001 Query 2073653 CAAAGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGA 2073712 | | |||||| || || || | |||||||||||| || |||| |||||||| || || | Sbjct 9106000 CCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATAAA 9105941 Query 2073713 TGCCCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752 |||| ||||| ||| |||||||| | ||| ||||| Sbjct 9105940 TGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCA 9105901 Score = 96.9 bits (106), Expect = 5e-14 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 2069564 TCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 2069623 ||||||| || | | || ||| | | || ||| || ||||||| | ||| || | Sbjct 9107203 TCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTC 9107144 Query 2069624 CCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGC 2069683 | || || || | ||| |||||||||||||| ||| | ||||| | |||| |||||| Sbjct 9107143 CGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGC 9107084 Query 2069684 CCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGC 2069743 |||||||||| | || | |||||||||||| | |||| ||||| ||| | || || Sbjct 9107083 CCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGC 9107024 Query 2069744 CGTACT 2069749 ||| || Sbjct 9107023 CGTGCT 9107018 >seq3119 Length=7517 Score = 93.3 bits (102), Expect = 7e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || |||||||| | ||||| || ||| ||| Sbjct 7409 TGTACTTGGTCACGGCCTTGGTGCCCTCAGACACGGCGTGTTTAGCCAGCTCACCGGGCA 7468 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573 | |||||| ||||||||||| ||||| | || | ||| ||| Sbjct 7469 GCAGCAGGCGGACGGCGGTCTGAATCTCCCTGGAGGTGATGGTG 7512 >seq6597 Length=1954 Score = 91.5 bits (100), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| |||||||| || || ||||||||||| |||||||||| ||| || ||| Sbjct 1060 ACCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGATGTCATGG 1119 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || |||||||||| | || ||||| | ||||| || ||||||||||| Sbjct 1120 TACTGGATGGGGAAGATGACGAAGCGCTGCGGGTTTTCTTTCAGCAGCGGCTC 1172 >seq25 Length=8751422 Score = 89.7 bits (98), Expect = 8e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 434126 CGTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 434185 ||| |||||||||||||| ||||||||||| |||| ||||| || ||| | ||||| Sbjct 4849146 CGTCATCTCCTTTGACGGTTCCTACGTCAACTACCGTCACTTGGCTCTGCTCTGTGACAC 4849087 Query 434186 CATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGG 434237 |||| ||| ||||| || ||||| |||| || |||||| |||||||| Sbjct 4849086 CATGACCTGCCGCGGTCACCTGATGGCCATCACACGTCACGGCATCAACCGG 4849035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915233182306475