Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq10 104 2e-17 >seq10 Length=14303885 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || ||||| | ||| |||||||| ||| |||| | |||| Sbjct 5456535 AGCATCTGGGGCCCAACTTGTGATGGTCTTGATCGCATTGTTGAGCAGTGTTACTTGCCT 5456476 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || | || |||||||||||||| | |||||||||||||| || |||| ||| | Sbjct 5456475 GACATGCAGGTGGGCGACTGGCTGGTCTTTGAAAACATGGGTGCCTACACTGTGGCTGCC 5456416 Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 ||||| ||||| || || |||| || || || |||||||| ||||| Sbjct 5456415 TCTTCCACCTTCAATGGTTTCCAAAGACCTGACCTTCACTATGTCATTTC 5456366 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || ||||| | ||| |||||||| ||| |||| | |||| Sbjct 5446378 AGCATCTGGGGCCCAACTTGTGATGGTCTTGATCGCATTGTTGAGCAGTGTTACTTGCCT 5446319 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || | || |||||||||||||| | |||||||||||||| || |||| ||| | Sbjct 5446318 GACATGCAGGTGGGCGACTGGCTGGTCTTTGAAAACATGGGTGCCTACACTGTGGCTGCC 5446259 Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 ||||| ||||| || || ||| || || || |||||||| || || Sbjct 5446258 TCTTCCACCTTCAATGGTTTCAAAAGACCTGACCTTCACTATGTCATGTC 5446209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463490409102000