Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 2e-15 seq19 96.9 6e-15 >seq18 Length=11751893 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || || ||||| || || ||| | || ||||||||||||| Sbjct 8354907 GAGCTCTGTGGTGGTATTTCATCTCCAAAGGCATTGAGTACCTGGACACAGTGTTTTTCA 8354848 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || || ||||| || || || |||| ||| || ||||| || || || | || |||| Sbjct 8354847 TTCTGAGAAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCACCATGT 8354788 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || |||||| | |||||||| ||| Sbjct 8354787 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 8354744 >seq19 Length=11184650 Score = 96.9 bits (106), Expect = 6e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 ||||||||||| || || ||||| | |||| ||| ||||||| |||||||| || ||| Sbjct 1415430 TGGTGGTACTACATCTCCAAAGGAGTGGAATTCTTGGATACAGCCTTTTTCATCCTGAGG 1415489 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTT 58497 || ||||| || || || ||||| || ||||| || ||||| | |||||||| Sbjct 1415490 AAGAAGTTCAACCAGGTCAGCTTCCTCCACGTCTACCATCACTGCACTATGTT 1415542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903303637604000