Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 132 3e-26 >seq7 Length=16146599 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| ||| || |||| ||| || ||| |||||| || |||||||| ||||| Sbjct 1869770 ACCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 1869711 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| |||| || || ||||| || || | ||||||||| ||| | || Sbjct 1869710 GAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGG 1869651 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | || |||||||| ||||| || ||||| ||| |||||| || | || | Sbjct 1869650 GATGCCCTCTTTGTCCTGGATTTTGGCCTT-AACATTTTCAATGGTGTCACTGGGCTCGA 1869592 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | ||||| ||||||||||||||| Sbjct 1869591 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCATA 1869542 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| || | ||| | ||| || ||| ||| || || ||||||||||| || Sbjct 1869542 ACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGA 1869483 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||| || || || |||||||||| | |||||| || | || Sbjct 1869482 CAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGG 1869423 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || || | || |||| || | |||||| || | || | Sbjct 1869422 GATGCCTTCCTTATCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 1869364 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| || | || || |||||||||||||| Sbjct 1869363 CCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 1869315 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| ||| | || | ||| || ||| ||||||||| || ||||| ||||| Sbjct 1869997 CCTCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCGGAC 1869938 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || |||| | |||||| || | || Sbjct 1869937 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGG 1869878 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| || || || || ||| | ||| ||| ||||||||| | || || Sbjct 1869877 ATGCCTTCCTTATCCTGGATCTTAGCTTTGA-CATTCTCAATGGTGTCGCTGGGCTCGAC 1869819 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || ||||| | || || ||||||||||||||| Sbjct 1869818 CTCCAGAGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCATA 1869770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328665842088000